RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
USP11-205ENST00000467378 CDC42SE1Q9NRR8 79 aa7.11□□□□□ -1.27
USP11-205ENST00000467378 LCE3AQ5TA76 89 aa7.09□□□□□ -1.27
USP11-205ENST00000467378 MT1EP04732 61 aa7.06□□□□□ -1.28
USP11-205ENST00000467378 KRTAP19-5Q3LI72 72 aa7.06□□□□□ -1.28
USP11-205ENST00000467378 HMCN1Q96RW7 5635 aa7.06□□□□□ -1.28
USP11-205ENST00000467378 KRTAP25-1Q3LHN0 102 aa7.02□□□□□ -1.29
USP11-205ENST00000467378 AHNAK2Q8IVF2 5795 aa7□□□□□ -1.29
USP11-205ENST00000467378 MT4P47944 62 aa6.98□□□□□ -1.29
USP11-205ENST00000467378 KRTAP5-10Q6L8G5 202 aa6.97□□□□□ -1.29
USP11-205ENST00000467378 LCE5AQ5TCM9 118 aa6.96□□□□□ -1.3
USP11-205ENST00000467378 KRTAP19-3Q7Z4W3 81 aa6.91□□□□□ -1.3
USP11-205ENST00000467378 LCE4AQ5TA78 99 aa6.89□□□□□ -1.31
USP11-205ENST00000467378 ROMO1P60602 79 aa6.87□□□□□ -1.31
USP11-205ENST00000467378 KRTAP23-1A1A580 65 aa6.81□□□□□ -1.32
USP11-205ENST00000467378 KRTAP12-3P60328 96 aa6.81□□□□□ -1.32
USP11-205ENST00000467378 MT1LQ93083 61 aa6.81□□□□□ -1.32
USP11-205ENST00000467378 MT1GP13640 62 aa6.8□□□□□ -1.32
USP11-205ENST00000467378 KRTAP5-7Q6L8G8 165 aa6.8□□□□□ -1.32
USP11-205ENST00000467378 BRK1Q8WUW1 75 aa6.72□□□□□ -1.33
USP11-205ENST00000467378 PP632Q6XCG6 107 aa6.7□□□□□ -1.34
USP11-205ENST00000467378 MT1MQ8N339 61 aa6.69□□□□□ -1.34
USP11-205ENST00000467378 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
USP11-205ENST00000467378 SPRR5A0A1B0GTR4 108 aa6.66□□□□□ -1.34
USP11-205ENST00000467378 KRTAP5-3Q6L8H2 238 aa6.65□□□□□ -1.34
USP11-205ENST00000467378 KRTAP5-4Q6L8H1 288 aa6.6□□□□□ -1.35
USP11-205ENST00000467378 KRTAP4-3Q9BYR4 195 aa6.53□□□□□ -1.36
USP11-205ENST00000467378 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
USP11-205ENST00000467378 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
USP11-205ENST00000467378 KRTAP19-4Q3LI73 84 aa6.46□□□□□ -1.38
USP11-205ENST00000467378 PMAIP1Q13794 54 aa6.35□□□□□ -1.39
USP11-205ENST00000467378 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
USP11-205ENST00000467378 KRTAP20-2Q3LI61 65 aa6.31□□□□□ -1.4
USP11-205ENST00000467378 PRO0628Q9UI54 55 aa6.21□□□□□ -1.42
USP11-205ENST00000467378 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
USP11-205ENST00000467378 KRTAP5-5Q701N2 237 aaPredicted RBP6.11□□□□□ -1.43
USP11-205ENST00000467378 KRTAP12-4P60329 112 aa6.07□□□□□ -1.44
USP11-205ENST00000467378 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
USP11-205ENST00000467378 AHNAKQ09666 5890 aaKnown RBP6□□□□□ -1.45
USP11-205ENST00000467378 KRTAP9-6A8MVA2 160 aa5.98□□□□□ -1.45
USP11-205ENST00000467378 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
USP11-205ENST00000467378 MUC5ACP98088 5654 aa5.93□□□□□ -1.46
USP11-205ENST00000467378 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
USP11-205ENST00000467378 KTN1-AS1Q86SY8 53 aa5.85□□□□□ -1.47
USP11-205ENST00000467378 MUC5BQ9HC84 5762 aaPredicted RBP5.83□□□□□ -1.48
USP11-205ENST00000467378 KRTAP5-8O75690 187 aa5.8□□□□□ -1.48
USP11-205ENST00000467378 MT1AP04731 61 aa5.8□□□□□ -1.48
USP11-205ENST00000467378 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
USP11-205ENST00000467378 KRTAP5-2Q701N4 177 aa5.64□□□□□ -1.51
USP11-205ENST00000467378 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
USP11-205ENST00000467378 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
USP11-205ENST00000467378 OBSCNQ5VST9 7968 aa5.52□□□□□ -1.53
USP11-205ENST00000467378 SVIPQ8NHG7 77 aa5.5□□□□□ -1.53
USP11-205ENST00000467378 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.54
USP11-205ENST00000467378 MT3P25713 68 aa5.28□□□□□ -1.56
USP11-205ENST00000467378 KRTAP5-1Q6L8H4 278 aa5.21□□□□□ -1.58
USP11-205ENST00000467378 LUZP6Q538Z0 58 aa4.99□□□□□ -1.61
USP11-205ENST00000467378 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
USP11-205ENST00000467378 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
USP11-205ENST00000467378 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
USP11-205ENST00000467378 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
USP11-205ENST00000467378 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
USP11-205ENST00000467378 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
USP11-205ENST00000467378 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
USP11-205ENST00000467378 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
USP11-205ENST00000467378 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
USP11-205ENST00000467378 PHGR1C9JFL3 82 aa4.14□□□□□ -1.75
USP11-205ENST00000467378 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
USP11-205ENST00000467378 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
USP11-205ENST00000467378 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
USP11-205ENST00000467378 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
USP11-205ENST00000467378 INE1O15225 51 aa3.6□□□□□ -1.83
USP11-205ENST00000467378 PRM1P04553 51 aa3.54□□□□□ -1.84
USP11-205ENST00000467378 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
USP11-205ENST00000467378 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
USP11-205ENST00000467378 H3BS24 57 aa3.3□□□□□ -1.88
USP11-205ENST00000467378 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
USP11-205ENST00000467378 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 280 ms