RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 MT1HP80294 61 aa2.84□□□□□ -1.95
SPTBN1-204ENST00000467371 KRTAP8-1Q8IUC2 63 aa2.83□□□□□ -1.96
SPTBN1-204ENST00000467371 MT1FP04733 61 aa2.83□□□□□ -1.96
SPTBN1-204ENST00000467371 KMT2DO14686 5537 aa2.82□□□□□ -1.96
SPTBN1-204ENST00000467371 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
SPTBN1-204ENST00000467371 KRTAP4-8A0A0G2JLE6 195 aa2.8□□□□□ -1.96
SPTBN1-204ENST00000467371 MT2AP02795 61 aa2.79□□□□□ -1.96
SPTBN1-204ENST00000467371 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
SPTBN1-204ENST00000467371 KRTAP10-5P60370 271 aa2.71□□□□□ -1.98
SPTBN1-204ENST00000467371 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
SPTBN1-204ENST00000467371 KRTAP4-7Q9BYR0 210 aa2.68□□□□□ -1.98
SPTBN1-204ENST00000467371 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
SPTBN1-204ENST00000467371 KRTAP4-9Q9BYQ8 210 aa2.66□□□□□ -1.98
SPTBN1-204ENST00000467371 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
SPTBN1-204ENST00000467371 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
SPTBN1-204ENST00000467371 MT1BP07438 61 aa2.65□□□□□ -1.99
SPTBN1-204ENST00000467371 MT1XP80297 61 aa2.63□□□□□ -1.99
SPTBN1-204ENST00000467371 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
SPTBN1-204ENST00000467371 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
SPTBN1-204ENST00000467371 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
SPTBN1-204ENST00000467371 KRTAP19-8Q3LI54 63 aa2.56□□□□□ -2
SPTBN1-204ENST00000467371 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
SPTBN1-204ENST00000467371 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
SPTBN1-204ENST00000467371 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2
SPTBN1-204ENST00000467371 MUC12Q9UKN1 5478 aa2.49□□□□□ -2.01
SPTBN1-204ENST00000467371 CRCT1Q9UGL9 99 aa2.49□□□□□ -2.01
SPTBN1-204ENST00000467371 FCGBPQ9Y6R7 5405 aaPredicted RBP2.48□□□□□ -2.01
SPTBN1-204ENST00000467371 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
SPTBN1-204ENST00000467371 SSPOA2VEC9 5147 aa2.47□□□□□ -2.01
SPTBN1-204ENST00000467371 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
SPTBN1-204ENST00000467371 SYNE2Q8WXH0 6885 aaKnown RBP2.38□□□□□ -2.03
SPTBN1-204ENST00000467371 KRTAP4-3Q9BYR4 195 aa2.36□□□□□ -2.03
SPTBN1-204ENST00000467371 MACF1Q9UPN3 7388 aaKnown RBP2.34□□□□□ -2.03
SPTBN1-204ENST00000467371 KRTAP19-7Q3SYF9 63 aa2.33□□□□□ -2.04
SPTBN1-204ENST00000467371 MT1GP13640 62 aa2.29□□□□□ -2.04
SPTBN1-204ENST00000467371 SPRR2FQ96RM1 72 aa2.27□□□□□ -2.05
SPTBN1-204ENST00000467371 MT1EP04732 61 aa2.27□□□□□ -2.05
SPTBN1-204ENST00000467371 KRTAP19-6Q3LI70 58 aa2.27□□□□□ -2.05
SPTBN1-204ENST00000467371 MT1LQ93083 61 aa2.27□□□□□ -2.05
SPTBN1-204ENST00000467371 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
SPTBN1-204ENST00000467371 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
SPTBN1-204ENST00000467371 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
SPTBN1-204ENST00000467371 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
SPTBN1-204ENST00000467371 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
SPTBN1-204ENST00000467371 PRM1P04553 51 aa2.15□□□□□ -2.07
SPTBN1-204ENST00000467371 MT1MQ8N339 61 aa2.14□□□□□ -2.07
SPTBN1-204ENST00000467371 MT1AP04731 61 aa2.14□□□□□ -2.07
SPTBN1-204ENST00000467371 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
SPTBN1-204ENST00000467371 SPRR2EP22531 72 aa2.04□□□□□ -2.08
SPTBN1-204ENST00000467371 SPRR2BP35325 72 aa2.04□□□□□ -2.08
SPTBN1-204ENST00000467371 SPRR2AP35326 72 aa2.04□□□□□ -2.08
SPTBN1-204ENST00000467371 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
SPTBN1-204ENST00000467371 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
SPTBN1-204ENST00000467371 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
SPTBN1-204ENST00000467371 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
SPTBN1-204ENST00000467371 SPRR2DP22532 72 aa1.93□□□□□ -2.1
SPTBN1-204ENST00000467371 KRTAP20-1Q3LI63 56 aa1.89□□□□□ -2.11
SPTBN1-204ENST00000467371 NEBP20929 6669 aa1.87□□□□□ -2.11
SPTBN1-204ENST00000467371 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
SPTBN1-204ENST00000467371 MT4P47944 62 aa1.85□□□□□ -2.11
SPTBN1-204ENST00000467371 KRTAP5-4Q6L8H1 288 aa1.84□□□□□ -2.11
SPTBN1-204ENST00000467371 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
SPTBN1-204ENST00000467371 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
SPTBN1-204ENST00000467371 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
SPTBN1-204ENST00000467371 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
SPTBN1-204ENST00000467371 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.14
SPTBN1-204ENST00000467371 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.15
SPTBN1-204ENST00000467371 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
SPTBN1-204ENST00000467371 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
SPTBN1-204ENST00000467371 KRTAP5-8O75690 187 aa1.61□□□□□ -2.15
SPTBN1-204ENST00000467371 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
SPTBN1-204ENST00000467371 MUC5ACP98088 5654 aa1.59□□□□□ -2.16
SPTBN1-204ENST00000467371 KRTAP20-2Q3LI61 65 aa1.57□□□□□ -2.16
SPTBN1-204ENST00000467371 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
SPTBN1-204ENST00000467371 KRTAP4-4Q9BYR3 166 aa1.41□□□□□ -2.18
SPTBN1-204ENST00000467371 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
SPTBN1-204ENST00000467371 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
SPTBN1-204ENST00000467371 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 5.3 ms