RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 TNXBP22105 4242 aa2.32□□□□□ -2.04
LRCH3-212ENST00000466845 KRTAP12-1P59990 96 aa2.32□□□□□ -2.04
LRCH3-212ENST00000466845 KRTAP13-1Q8IUC0 172 aa2.3□□□□□ -2.04
LRCH3-212ENST00000466845 LRP2P98164 4655 aa2.3□□□□□ -2.04
LRCH3-212ENST00000466845 RNF213Q63HN8 5207 aa2.28□□□□□ -2.04
LRCH3-212ENST00000466845 A0A0D9SG42 100 aa2.28□□□□□ -2.04
LRCH3-212ENST00000466845 KRTAP6-3Q3LI67 103 aa2.26□□□□□ -2.05
LRCH3-212ENST00000466845 RPS29P62273 56 aaKnown RBP2.22□□□□□ -2.05
LRCH3-212ENST00000466845 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
LRCH3-212ENST00000466845 LPAP08519 4548 aa2.21□□□□□ -2.05
LRCH3-212ENST00000466845 C9orf92A6NGG3 77 aa2.17□□□□□ -2.06
LRCH3-212ENST00000466845 MUC2Q02817 5179 aa2.16□□□□□ -2.06
LRCH3-212ENST00000466845 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
LRCH3-212ENST00000466845 MUC17Q685J3 4493 aa2.13□□□□□ -2.07
LRCH3-212ENST00000466845 FAT4Q6V0I7 4981 aa2.12□□□□□ -2.07
LRCH3-212ENST00000466845 KRTAP4-1Q9BYQ7 146 aa2.12□□□□□ -2.07
LRCH3-212ENST00000466845 M0R2T5 61 aa2.11□□□□□ -2.07
LRCH3-212ENST00000466845 M0QZ58 72 aa2.09□□□□□ -2.07
LRCH3-212ENST00000466845 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
LRCH3-212ENST00000466845 MT1HP80294 61 aa2.07□□□□□ -2.08
LRCH3-212ENST00000466845 KRTAP19-2Q3LHN2 52 aa2.04□□□□□ -2.08
LRCH3-212ENST00000466845 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
LRCH3-212ENST00000466845 FLGP20930 4061 aaPredicted RBP1.99□□□□□ -2.09
LRCH3-212ENST00000466845 FSIP2Q5CZC0 6907 aa1.99□□□□□ -2.09
LRCH3-212ENST00000466845 MT2AP02795 61 aa1.93□□□□□ -2.1
LRCH3-212ENST00000466845 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
LRCH3-212ENST00000466845 MT1FP04733 61 aa1.91□□□□□ -2.1
LRCH3-212ENST00000466845 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.11
LRCH3-212ENST00000466845 USH2AO75445 5202 aa1.88□□□□□ -2.11
LRCH3-212ENST00000466845 TNP1P09430 55 aa1.87□□□□□ -2.11
LRCH3-212ENST00000466845 SSPOA2VEC9 5147 aa1.85□□□□□ -2.11
LRCH3-212ENST00000466845 FCGBPQ9Y6R7 5405 aaPredicted RBP1.83□□□□□ -2.12
LRCH3-212ENST00000466845 KRTAP2-3P0C7H8 128 aa1.83□□□□□ -2.12
LRCH3-212ENST00000466845 KRTAP2-4Q9BYR9 128 aa1.83□□□□□ -2.12
LRCH3-212ENST00000466845 KRTAP2-1Q9BYU5 128 aa1.83□□□□□ -2.12
LRCH3-212ENST00000466845 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
LRCH3-212ENST00000466845 KRTAP19-6Q3LI70 58 aa1.82□□□□□ -2.12
LRCH3-212ENST00000466845 MACF1Q9UPN3 7388 aaKnown RBP1.79□□□□□ -2.12
LRCH3-212ENST00000466845 SYNE2Q8WXH0 6885 aaKnown RBP1.78□□□□□ -2.12
LRCH3-212ENST00000466845 SPRR2GQ9BYE4 73 aa1.74□□□□□ -2.13
LRCH3-212ENST00000466845 MT1BP07438 61 aa1.73□□□□□ -2.13
LRCH3-212ENST00000466845 KRTAP19-8Q3LI54 63 aa1.73□□□□□ -2.13
LRCH3-212ENST00000466845 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
LRCH3-212ENST00000466845 NEBP20929 6669 aa1.71□□□□□ -2.14
LRCH3-212ENST00000466845 KRTAP20-1Q3LI63 56 aa1.67□□□□□ -2.14
LRCH3-212ENST00000466845 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.15
LRCH3-212ENST00000466845 SPRR2FQ96RM1 72 aa1.64□□□□□ -2.15
LRCH3-212ENST00000466845 SPRR2EP22531 72 aa1.63□□□□□ -2.15
LRCH3-212ENST00000466845 SPRR2BP35325 72 aa1.63□□□□□ -2.15
LRCH3-212ENST00000466845 SPRR2AP35326 72 aa1.63□□□□□ -2.15
LRCH3-212ENST00000466845 MUC12Q9UKN1 5478 aa1.62□□□□□ -2.15
LRCH3-212ENST00000466845 MT1XP80297 61 aa1.62□□□□□ -2.15
LRCH3-212ENST00000466845 KMT2DO14686 5537 aa1.61□□□□□ -2.15
LRCH3-212ENST00000466845 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
LRCH3-212ENST00000466845 PRM1P04553 51 aa1.59□□□□□ -2.15
LRCH3-212ENST00000466845 SPRR2DP22532 72 aa1.58□□□□□ -2.16
LRCH3-212ENST00000466845 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
LRCH3-212ENST00000466845 MT1EP04732 61 aa1.45□□□□□ -2.18
LRCH3-212ENST00000466845 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
LRCH3-212ENST00000466845 KRTAP19-7Q3SYF9 63 aa1.44□□□□□ -2.18
LRCH3-212ENST00000466845 KRTAP19-5Q3LI72 72 aa1.43□□□□□ -2.18
LRCH3-212ENST00000466845 MT1GP13640 62 aa1.41□□□□□ -2.18
LRCH3-212ENST00000466845 MT1MQ8N339 61 aa1.39□□□□□ -2.19
LRCH3-212ENST00000466845 DSTQ03001 7570 aaKnown RBP1.39□□□□□ -2.19
LRCH3-212ENST00000466845 MT1LQ93083 61 aa1.38□□□□□ -2.19
LRCH3-212ENST00000466845 MT4P47944 62 aa1.37□□□□□ -2.19
LRCH3-212ENST00000466845 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
LRCH3-212ENST00000466845 MT1AP04731 61 aa1.34□□□□□ -2.19
LRCH3-212ENST00000466845 KRTAP5-10Q6L8G5 202 aa1.33□□□□□ -2.2
LRCH3-212ENST00000466845 KRTAP6-2Q3LI66 62 aa1.28□□□□□ -2.2
LRCH3-212ENST00000466845 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
LRCH3-212ENST00000466845 KRTAP20-2Q3LI61 65 aa1.26□□□□□ -2.21
LRCH3-212ENST00000466845 SYNE1Q8NF91 8797 aaKnown RBP1.24□□□□□ -2.21
LRCH3-212ENST00000466845 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
LRCH3-212ENST00000466845 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
LRCH3-212ENST00000466845 KRTAP6-1Q3LI64 71 aa1.16□□□□□ -2.22
LRCH3-212ENST00000466845 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
LRCH3-212ENST00000466845 PHGR1C9JFL3 82 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 79.6 ms