RNA–Protein interactions for RNA: ENST00000466830.5

CMC1-205, Transcript of C-X9-C motif containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC1, Length 6,033 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-205ENST00000466830 LCE2AQ5TA79 106 aaPredicted RBP3.63□□□□□ -1.83
CMC1-205ENST00000466830 MUC2Q02817 5179 aa3.6□□□□□ -1.83
CMC1-205ENST00000466830 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
CMC1-205ENST00000466830 MT1MQ8N339 61 aa3.58□□□□□ -1.84
CMC1-205ENST00000466830 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
CMC1-205ENST00000466830 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
CMC1-205ENST00000466830 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
CMC1-205ENST00000466830 LCE2DQ5TA82 110 aaPredicted RBP3.51□□□□□ -1.85
CMC1-205ENST00000466830 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
CMC1-205ENST00000466830 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
CMC1-205ENST00000466830 KRTAP9-2Q9BYQ4 174 aa3.41□□□□□ -1.86
CMC1-205ENST00000466830 KRTAP2-3P0C7H8 128 aa3.38□□□□□ -1.87
CMC1-205ENST00000466830 KRTAP2-4Q9BYR9 128 aa3.38□□□□□ -1.87
CMC1-205ENST00000466830 KRTAP2-1Q9BYU5 128 aa3.38□□□□□ -1.87
CMC1-205ENST00000466830 MT3P25713 68 aa3.37□□□□□ -1.87
CMC1-205ENST00000466830 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
CMC1-205ENST00000466830 MT1AP04731 61 aa3.32□□□□□ -1.88
CMC1-205ENST00000466830 USH2AO75445 5202 aa3.26□□□□□ -1.89
CMC1-205ENST00000466830 PRM1P04553 51 aa3.25□□□□□ -1.89
CMC1-205ENST00000466830 MT4P47944 62 aa3.24□□□□□ -1.89
CMC1-205ENST00000466830 SYNE2Q8WXH0 6885 aaKnown RBP3.21□□□□□ -1.9
CMC1-205ENST00000466830 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
CMC1-205ENST00000466830 LCE5AQ5TCM9 118 aa3.21□□□□□ -1.9
CMC1-205ENST00000466830 KRTAP4-9Q9BYQ8 210 aa3.21□□□□□ -1.9
CMC1-205ENST00000466830 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
CMC1-205ENST00000466830 FCGBPQ9Y6R7 5405 aaPredicted RBP3.18□□□□□ -1.9
CMC1-205ENST00000466830 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
CMC1-205ENST00000466830 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
CMC1-205ENST00000466830 KMT2DO14686 5537 aa3.11□□□□□ -1.91
CMC1-205ENST00000466830 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.91
CMC1-205ENST00000466830 LCE1DQ5T752 114 aa3.09□□□□□ -1.91
CMC1-205ENST00000466830 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.92
CMC1-205ENST00000466830 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
CMC1-205ENST00000466830 KRTAP9-4Q9BYQ2 154 aa3.05□□□□□ -1.92
CMC1-205ENST00000466830 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
CMC1-205ENST00000466830 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
CMC1-205ENST00000466830 KRTAP9-7A8MTY7 169 aa2.98□□□□□ -1.93
CMC1-205ENST00000466830 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
CMC1-205ENST00000466830 MUC12Q9UKN1 5478 aa2.93□□□□□ -1.94
CMC1-205ENST00000466830 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
CMC1-205ENST00000466830 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
CMC1-205ENST00000466830 KRTAP20-1Q3LI63 56 aa2.91□□□□□ -1.94
CMC1-205ENST00000466830 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
CMC1-205ENST00000466830 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.95
CMC1-205ENST00000466830 KRTAP5-9P26371 169 aa2.83□□□□□ -1.96
CMC1-205ENST00000466830 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
CMC1-205ENST00000466830 NEBP20929 6669 aa2.69□□□□□ -1.98
CMC1-205ENST00000466830 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
CMC1-205ENST00000466830 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
CMC1-205ENST00000466830 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
CMC1-205ENST00000466830 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
CMC1-205ENST00000466830 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
CMC1-205ENST00000466830 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
CMC1-205ENST00000466830 KRTAP4-11Q9BYQ6 195 aa2.4□□□□□ -2.02
CMC1-205ENST00000466830 KRTAP9-9Q9BYP9 154 aa2.39□□□□□ -2.03
CMC1-205ENST00000466830 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
CMC1-205ENST00000466830 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
CMC1-205ENST00000466830 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
CMC1-205ENST00000466830 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
CMC1-205ENST00000466830 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
CMC1-205ENST00000466830 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
CMC1-205ENST00000466830 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
CMC1-205ENST00000466830 KRTAP5-3Q6L8H2 238 aa2.09□□□□□ -2.07
CMC1-205ENST00000466830 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
CMC1-205ENST00000466830 KRTAP5-2Q701N4 177 aa2.04□□□□□ -2.08
CMC1-205ENST00000466830 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
CMC1-205ENST00000466830 KRTAP5-8O75690 187 aa1.9□□□□□ -2.1
CMC1-205ENST00000466830 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
CMC1-205ENST00000466830 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
CMC1-205ENST00000466830 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.13
CMC1-205ENST00000466830 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
CMC1-205ENST00000466830 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
CMC1-205ENST00000466830 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
CMC1-205ENST00000466830 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.17
CMC1-205ENST00000466830 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
CMC1-205ENST00000466830 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
CMC1-205ENST00000466830 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 83.7 ms