RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
ATG3-203ENST00000465980 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
ATG3-203ENST00000465980 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
ATG3-203ENST00000465980 A8MU10 97 aa4.09□□□□□ -1.75
ATG3-203ENST00000465980 A0A0D9SG42 100 aa4.08□□□□□ -1.76
ATG3-203ENST00000465980 LINC01554Q52M75 96 aa4.08□□□□□ -1.76
ATG3-203ENST00000465980 PMAIP1Q13794 54 aa4.06□□□□□ -1.76
ATG3-203ENST00000465980 KRTAP4-3Q9BYR4 195 aa4.06□□□□□ -1.76
ATG3-203ENST00000465980 BRK1Q8WUW1 75 aa4.05□□□□□ -1.76
ATG3-203ENST00000465980 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
ATG3-203ENST00000465980 KMT2DO14686 5537 aa4.02□□□□□ -1.77
ATG3-203ENST00000465980 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
ATG3-203ENST00000465980 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
ATG3-203ENST00000465980 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
ATG3-203ENST00000465980 K7ERS5 55 aa3.98□□□□□ -1.77
ATG3-203ENST00000465980 PLAC4Q8WY50 150 aa3.98□□□□□ -1.77
ATG3-203ENST00000465980 KRTAP20-1Q3LI63 56 aa3.95□□□□□ -1.78
ATG3-203ENST00000465980 MT1XP80297 61 aa3.91□□□□□ -1.78
ATG3-203ENST00000465980 CAMK2N1Q7Z7J9 78 aa3.91□□□□□ -1.78
ATG3-203ENST00000465980 PRO2289Q9P1D8 64 aa3.9□□□□□ -1.79
ATG3-203ENST00000465980 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
ATG3-203ENST00000465980 SPRR2EP22531 72 aa3.85□□□□□ -1.79
ATG3-203ENST00000465980 SPRR2BP35325 72 aa3.85□□□□□ -1.79
ATG3-203ENST00000465980 SPRR2AP35326 72 aa3.85□□□□□ -1.79
ATG3-203ENST00000465980 LCE3AQ5TA76 89 aa3.85□□□□□ -1.79
ATG3-203ENST00000465980 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
ATG3-203ENST00000465980 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
ATG3-203ENST00000465980 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
ATG3-203ENST00000465980 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
ATG3-203ENST00000465980 C10orf95Q9H7T3 257 aa3.81□□□□□ -1.8
ATG3-203ENST00000465980 ROMO1P60602 79 aa3.8□□□□□ -1.8
ATG3-203ENST00000465980 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
ATG3-203ENST00000465980 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
ATG3-203ENST00000465980 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
ATG3-203ENST00000465980 TNP1P09430 55 aa3.72□□□□□ -1.81
ATG3-203ENST00000465980 SPRR2DP22532 72 aa3.72□□□□□ -1.81
ATG3-203ENST00000465980 KRTAP25-1Q3LHN0 102 aa3.71□□□□□ -1.82
ATG3-203ENST00000465980 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
ATG3-203ENST00000465980 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
ATG3-203ENST00000465980 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
ATG3-203ENST00000465980 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
ATG3-203ENST00000465980 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
ATG3-203ENST00000465980 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
ATG3-203ENST00000465980 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
ATG3-203ENST00000465980 MT1EP04732 61 aa3.46□□□□□ -1.86
ATG3-203ENST00000465980 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
ATG3-203ENST00000465980 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
ATG3-203ENST00000465980 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
ATG3-203ENST00000465980 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
ATG3-203ENST00000465980 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
ATG3-203ENST00000465980 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
ATG3-203ENST00000465980 MT1GP13640 62 aa3.33□□□□□ -1.88
ATG3-203ENST00000465980 MT1MQ8N339 61 aa3.31□□□□□ -1.88
ATG3-203ENST00000465980 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
ATG3-203ENST00000465980 MT1LQ93083 61 aa3.3□□□□□ -1.88
ATG3-203ENST00000465980 MT4P47944 62 aa3.28□□□□□ -1.88
ATG3-203ENST00000465980 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
ATG3-203ENST00000465980 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
ATG3-203ENST00000465980 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
ATG3-203ENST00000465980 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
ATG3-203ENST00000465980 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
ATG3-203ENST00000465980 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
ATG3-203ENST00000465980 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
ATG3-203ENST00000465980 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
ATG3-203ENST00000465980 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
ATG3-203ENST00000465980 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
ATG3-203ENST00000465980 MT1AP04731 61 aa2.81□□□□□ -1.96
ATG3-203ENST00000465980 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
ATG3-203ENST00000465980 INE1O15225 51 aa2.71□□□□□ -1.98
ATG3-203ENST00000465980 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
ATG3-203ENST00000465980 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
ATG3-203ENST00000465980 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
ATG3-203ENST00000465980 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
ATG3-203ENST00000465980 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
ATG3-203ENST00000465980 PRM1P04553 51 aa1.97□□□□□ -2.09
ATG3-203ENST00000465980 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
ATG3-203ENST00000465980 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
ATG3-203ENST00000465980 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 79.8 ms