RNA–Protein interactions for RNA: ENST00000465900.5

SND1-204, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-204ENST00000465900 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
SND1-204ENST00000465900 KRTAP19-6Q3LI70 58 aa2.84□□□□□ -1.95
SND1-204ENST00000465900 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
SND1-204ENST00000465900 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
SND1-204ENST00000465900 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
SND1-204ENST00000465900 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
SND1-204ENST00000465900 MT2AP02795 61 aa2.77□□□□□ -1.97
SND1-204ENST00000465900 MT1FP04733 61 aa2.77□□□□□ -1.97
SND1-204ENST00000465900 C9orf92A6NGG3 77 aa2.76□□□□□ -1.97
SND1-204ENST00000465900 S4R3F8 94 aa2.75□□□□□ -1.97
SND1-204ENST00000465900 KRTAP13-4Q3LI77 160 aa2.72□□□□□ -1.97
SND1-204ENST00000465900 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
SND1-204ENST00000465900 KRTAP2-1Q9BYU5 128 aa2.67□□□□□ -1.98
SND1-204ENST00000465900 KRTAP10-10P60014 251 aa2.63□□□□□ -1.99
SND1-204ENST00000465900 KRTAP10-12P60413 245 aa2.6□□□□□ -1.99
SND1-204ENST00000465900 KRTAP12-1P59990 96 aa2.57□□□□□ -2
SND1-204ENST00000465900 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
SND1-204ENST00000465900 A0A0D9SG42 100 aa2.55□□□□□ -2
SND1-204ENST00000465900 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
SND1-204ENST00000465900 SPRR2EP22531 72 aa2.53□□□□□ -2
SND1-204ENST00000465900 SPRR2BP35325 72 aa2.53□□□□□ -2
SND1-204ENST00000465900 SPRR2AP35326 72 aa2.53□□□□□ -2
SND1-204ENST00000465900 M0QZ58 72 aa2.51□□□□□ -2.01
SND1-204ENST00000465900 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
SND1-204ENST00000465900 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
SND1-204ENST00000465900 SPRR2FQ96RM1 72 aa2.45□□□□□ -2.02
SND1-204ENST00000465900 SPRR2DP22532 72 aa2.44□□□□□ -2.02
SND1-204ENST00000465900 MT1BP07438 61 aa2.42□□□□□ -2.02
SND1-204ENST00000465900 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
SND1-204ENST00000465900 KRTAP10-5P60370 271 aa2.41□□□□□ -2.02
SND1-204ENST00000465900 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
SND1-204ENST00000465900 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
SND1-204ENST00000465900 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
SND1-204ENST00000465900 SPRR2GQ9BYE4 73 aa2.33□□□□□ -2.04
SND1-204ENST00000465900 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
SND1-204ENST00000465900 LCE1EQ5T753 118 aa2.31□□□□□ -2.04
SND1-204ENST00000465900 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
SND1-204ENST00000465900 KRTAP10-7P60409 375 aaPredicted RBP2.27□□□□□ -2.05
SND1-204ENST00000465900 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
SND1-204ENST00000465900 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
SND1-204ENST00000465900 TNP1P09430 55 aa2.23□□□□□ -2.05
SND1-204ENST00000465900 MT4P47944 62 aa2.22□□□□□ -2.05
SND1-204ENST00000465900 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
SND1-204ENST00000465900 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
SND1-204ENST00000465900 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
SND1-204ENST00000465900 MT1XP80297 61 aa2.13□□□□□ -2.07
SND1-204ENST00000465900 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
SND1-204ENST00000465900 KRTAP9-6A8MVA2 160 aa2.11□□□□□ -2.07
SND1-204ENST00000465900 KRTAP5-4Q6L8H1 288 aa2.07□□□□□ -2.08
SND1-204ENST00000465900 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
SND1-204ENST00000465900 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
SND1-204ENST00000465900 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
SND1-204ENST00000465900 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.1
SND1-204ENST00000465900 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
SND1-204ENST00000465900 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
SND1-204ENST00000465900 KRTAP19-7Q3SYF9 63 aa1.93□□□□□ -2.1
SND1-204ENST00000465900 SYNE1Q8NF91 8797 aaKnown RBP1.92□□□□□ -2.1
SND1-204ENST00000465900 MT1EP04732 61 aa1.91□□□□□ -2.1
SND1-204ENST00000465900 MT1GP13640 62 aa1.91□□□□□ -2.1
SND1-204ENST00000465900 KRTAP4-3Q9BYR4 195 aa1.91□□□□□ -2.1
SND1-204ENST00000465900 MT1MQ8N339 61 aa1.85□□□□□ -2.11
SND1-204ENST00000465900 OBSCNQ5VST9 7968 aa1.83□□□□□ -2.12
SND1-204ENST00000465900 KRTAP19-5Q3LI72 72 aa1.82□□□□□ -2.12
SND1-204ENST00000465900 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
SND1-204ENST00000465900 LCE3AQ5TA76 89 aa1.8□□□□□ -2.12
SND1-204ENST00000465900 MT1LQ93083 61 aa1.8□□□□□ -2.12
SND1-204ENST00000465900 KRTAP5-5Q701N2 237 aaPredicted RBP1.77□□□□□ -2.13
SND1-204ENST00000465900 PRM1P04553 51 aa1.72□□□□□ -2.13
SND1-204ENST00000465900 MT1AP04731 61 aa1.59□□□□□ -2.15
SND1-204ENST00000465900 KRTAP6-1Q3LI64 71 aa1.52□□□□□ -2.17
SND1-204ENST00000465900 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
SND1-204ENST00000465900 LCE1CQ5T751 118 aa1.5□□□□□ -2.17
SND1-204ENST00000465900 LCE1BQ5T7P3 118 aa1.5□□□□□ -2.17
SND1-204ENST00000465900 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
SND1-204ENST00000465900 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
SND1-204ENST00000465900 MUC19Q7Z5P9 8384 aa1.19□□□□□ -2.22
SND1-204ENST00000465900 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
SND1-204ENST00000465900 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 246.7 ms