RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 KRTAP19-5Q3LI72 72 aa4.59□□□□□ -1.67
CHPF2-202ENST00000465601 KRTAP2-4Q9BYR9 128 aa4.59□□□□□ -1.67
CHPF2-202ENST00000465601 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
CHPF2-202ENST00000465601 PRAC1Q96KF2 57 aa4.54□□□□□ -1.68
CHPF2-202ENST00000465601 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
CHPF2-202ENST00000465601 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
CHPF2-202ENST00000465601 KRTAP25-1Q3LHN0 102 aa4.48□□□□□ -1.69
CHPF2-202ENST00000465601 LCE3BQ5TA77 95 aa4.46□□□□□ -1.7
CHPF2-202ENST00000465601 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.7
CHPF2-202ENST00000465601 KRTAP2-1Q9BYU5 128 aa4.46□□□□□ -1.7
CHPF2-202ENST00000465601 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
CHPF2-202ENST00000465601 MT1GP13640 62 aa4.42□□□□□ -1.7
CHPF2-202ENST00000465601 MT1LQ93083 61 aa4.42□□□□□ -1.7
CHPF2-202ENST00000465601 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
CHPF2-202ENST00000465601 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
CHPF2-202ENST00000465601 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
CHPF2-202ENST00000465601 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
CHPF2-202ENST00000465601 MT1MQ8N339 61 aa4.36□□□□□ -1.71
CHPF2-202ENST00000465601 ROMO1P60602 79 aa4.34□□□□□ -1.71
CHPF2-202ENST00000465601 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
CHPF2-202ENST00000465601 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
CHPF2-202ENST00000465601 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
CHPF2-202ENST00000465601 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
CHPF2-202ENST00000465601 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
CHPF2-202ENST00000465601 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
CHPF2-202ENST00000465601 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
CHPF2-202ENST00000465601 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
CHPF2-202ENST00000465601 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
CHPF2-202ENST00000465601 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
CHPF2-202ENST00000465601 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
CHPF2-202ENST00000465601 MT4P47944 62 aa4.02□□□□□ -1.77
CHPF2-202ENST00000465601 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
CHPF2-202ENST00000465601 LOC100996750A0A140TA64 210 aa4.01□□□□□ -1.77
CHPF2-202ENST00000465601 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
CHPF2-202ENST00000465601 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
CHPF2-202ENST00000465601 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
CHPF2-202ENST00000465601 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
CHPF2-202ENST00000465601 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
CHPF2-202ENST00000465601 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
CHPF2-202ENST00000465601 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
CHPF2-202ENST00000465601 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
CHPF2-202ENST00000465601 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
CHPF2-202ENST00000465601 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
CHPF2-202ENST00000465601 MT1AP04731 61 aa3.76□□□□□ -1.81
CHPF2-202ENST00000465601 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
CHPF2-202ENST00000465601 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
CHPF2-202ENST00000465601 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
CHPF2-202ENST00000465601 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
CHPF2-202ENST00000465601 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
CHPF2-202ENST00000465601 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
CHPF2-202ENST00000465601 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
CHPF2-202ENST00000465601 MT3P25713 68 aa3.43□□□□□ -1.86
CHPF2-202ENST00000465601 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
CHPF2-202ENST00000465601 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
CHPF2-202ENST00000465601 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
CHPF2-202ENST00000465601 INE1O15225 51 aa3.25□□□□□ -1.89
CHPF2-202ENST00000465601 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
CHPF2-202ENST00000465601 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
CHPF2-202ENST00000465601 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
CHPF2-202ENST00000465601 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
CHPF2-202ENST00000465601 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
CHPF2-202ENST00000465601 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
CHPF2-202ENST00000465601 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
CHPF2-202ENST00000465601 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
CHPF2-202ENST00000465601 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
CHPF2-202ENST00000465601 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
CHPF2-202ENST00000465601 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
CHPF2-202ENST00000465601 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
CHPF2-202ENST00000465601 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
CHPF2-202ENST00000465601 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
CHPF2-202ENST00000465601 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
CHPF2-202ENST00000465601 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
CHPF2-202ENST00000465601 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
CHPF2-202ENST00000465601 PRM1P04553 51 aa2.24□□□□□ -2.05
CHPF2-202ENST00000465601 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
CHPF2-202ENST00000465601 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
CHPF2-202ENST00000465601 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
CHPF2-202ENST00000465601 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 122.5 ms