RNA–Protein interactions for RNA: ENST00000465352.1

ABCA4-203, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 1,048 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-203ENST00000465352 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
ABCA4-203ENST00000465352 MT1EP04732 61 aa5.32□□□□□ -1.56
ABCA4-203ENST00000465352 KRTAP19-3Q7Z4W3 81 aa5.32□□□□□ -1.56
ABCA4-203ENST00000465352 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
ABCA4-203ENST00000465352 Q1T7F1 81 aa5.29□□□□□ -1.56
ABCA4-203ENST00000465352 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
ABCA4-203ENST00000465352 A0A1B0GU69 56 aa5.26□□□□□ -1.57
ABCA4-203ENST00000465352 KRTAP4-2Q9BYR5 136 aa5.26□□□□□ -1.57
ABCA4-203ENST00000465352 KTN1-AS1Q86SY8 53 aa5.25□□□□□ -1.57
ABCA4-203ENST00000465352 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
ABCA4-203ENST00000465352 MT1GP13640 62 aa5.21□□□□□ -1.58
ABCA4-203ENST00000465352 PP632Q6XCG6 107 aa5.2□□□□□ -1.58
ABCA4-203ENST00000465352 A8MU10 97 aa5.14□□□□□ -1.59
ABCA4-203ENST00000465352 TNP1P09430 55 aa5.13□□□□□ -1.59
ABCA4-203ENST00000465352 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
ABCA4-203ENST00000465352 PRR15LQ9BU68 103 aa5.12□□□□□ -1.59
ABCA4-203ENST00000465352 KRTAP4-11Q9BYQ6 195 aa5.11□□□□□ -1.59
ABCA4-203ENST00000465352 MT1MQ8N339 61 aa5.08□□□□□ -1.6
ABCA4-203ENST00000465352 MT1LQ93083 61 aa5.08□□□□□ -1.6
ABCA4-203ENST00000465352 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
ABCA4-203ENST00000465352 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
ABCA4-203ENST00000465352 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
ABCA4-203ENST00000465352 CDC42SE1Q9NRR8 79 aa5.01□□□□□ -1.61
ABCA4-203ENST00000465352 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
ABCA4-203ENST00000465352 MT4P47944 62 aa4.96□□□□□ -1.62
ABCA4-203ENST00000465352 PSPHP1O15172 72 aa4.94□□□□□ -1.62
ABCA4-203ENST00000465352 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
ABCA4-203ENST00000465352 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
ABCA4-203ENST00000465352 UQCR11O14957 56 aa4.92□□□□□ -1.62
ABCA4-203ENST00000465352 KRTAP12-3P60328 96 aa4.89□□□□□ -1.63
ABCA4-203ENST00000465352 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
ABCA4-203ENST00000465352 A6NED7 52 aa4.86□□□□□ -1.63
ABCA4-203ENST00000465352 K7ERS5 55 aa4.79□□□□□ -1.64
ABCA4-203ENST00000465352 KRTAP25-1Q3LHN0 102 aa4.79□□□□□ -1.64
ABCA4-203ENST00000465352 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
ABCA4-203ENST00000465352 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
ABCA4-203ENST00000465352 KRTAP5-3Q6L8H2 238 aa4.76□□□□□ -1.65
ABCA4-203ENST00000465352 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
ABCA4-203ENST00000465352 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
ABCA4-203ENST00000465352 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
ABCA4-203ENST00000465352 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
ABCA4-203ENST00000465352 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
ABCA4-203ENST00000465352 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
ABCA4-203ENST00000465352 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
ABCA4-203ENST00000465352 ROMO1P60602 79 aa4.57□□□□□ -1.68
ABCA4-203ENST00000465352 KRTAP5-7Q6L8G8 165 aa4.55□□□□□ -1.68
ABCA4-203ENST00000465352 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
ABCA4-203ENST00000465352 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.7
ABCA4-203ENST00000465352 MT1AP04731 61 aa4.34□□□□□ -1.71
ABCA4-203ENST00000465352 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
ABCA4-203ENST00000465352 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
ABCA4-203ENST00000465352 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
ABCA4-203ENST00000465352 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
ABCA4-203ENST00000465352 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
ABCA4-203ENST00000465352 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
ABCA4-203ENST00000465352 KRTAP5-8O75690 187 aa4.09□□□□□ -1.75
ABCA4-203ENST00000465352 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
ABCA4-203ENST00000465352 MT3P25713 68 aa4□□□□□ -1.77
ABCA4-203ENST00000465352 MUC5BQ9HC84 5762 aaPredicted RBP3.97□□□□□ -1.77
ABCA4-203ENST00000465352 AHNAKQ09666 5890 aaKnown RBP3.93□□□□□ -1.78
ABCA4-203ENST00000465352 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
ABCA4-203ENST00000465352 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
ABCA4-203ENST00000465352 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
ABCA4-203ENST00000465352 INE1O15225 51 aa3.65□□□□□ -1.83
ABCA4-203ENST00000465352 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
ABCA4-203ENST00000465352 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
ABCA4-203ENST00000465352 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
ABCA4-203ENST00000465352 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
ABCA4-203ENST00000465352 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
ABCA4-203ENST00000465352 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
ABCA4-203ENST00000465352 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
ABCA4-203ENST00000465352 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
ABCA4-203ENST00000465352 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
ABCA4-203ENST00000465352 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
ABCA4-203ENST00000465352 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
ABCA4-203ENST00000465352 PRM1P04553 51 aa2.2□□□□□ -2.06
ABCA4-203ENST00000465352 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
ABCA4-203ENST00000465352 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms