RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
USP39-211ENST00000465282 SPRR2DP22532 72 aa6.2□□□□□ -1.42
USP39-211ENST00000465282 KRTAP19-3Q7Z4W3 81 aa6.17□□□□□ -1.42
USP39-211ENST00000465282 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
USP39-211ENST00000465282 KRTAP4-6Q9BYQ5 205 aa6.16□□□□□ -1.42
USP39-211ENST00000465282 KRTAP23-1A1A580 65 aa6.15□□□□□ -1.42
USP39-211ENST00000465282 ROMO1P60602 79 aa6.15□□□□□ -1.42
USP39-211ENST00000465282 LCE5AQ5TCM9 118 aa6.14□□□□□ -1.43
USP39-211ENST00000465282 MT1GP13640 62 aa6.09□□□□□ -1.43
USP39-211ENST00000465282 KRTAP12-3P60328 96 aa6.09□□□□□ -1.43
USP39-211ENST00000465282 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
USP39-211ENST00000465282 GPR98Q8WXG9 6306 aa6.05□□□□□ -1.44
USP39-211ENST00000465282 MT1LQ93083 61 aa6.04□□□□□ -1.44
USP39-211ENST00000465282 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
USP39-211ENST00000465282 BRK1Q8WUW1 75 aa5.99□□□□□ -1.45
USP39-211ENST00000465282 MT1MQ8N339 61 aa5.94□□□□□ -1.46
USP39-211ENST00000465282 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
USP39-211ENST00000465282 DSTQ03001 7570 aaKnown RBP5.88□□□□□ -1.47
USP39-211ENST00000465282 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
USP39-211ENST00000465282 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
USP39-211ENST00000465282 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
USP39-211ENST00000465282 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
USP39-211ENST00000465282 KRTAP4-9Q9BYQ8 210 aa5.67□□□□□ -1.5
USP39-211ENST00000465282 LCE3CQ5T5A8 94 aa5.64□□□□□ -1.51
USP39-211ENST00000465282 PRO0628Q9UI54 55 aa5.56□□□□□ -1.52
USP39-211ENST00000465282 LCE4AQ5TA78 99 aa5.55□□□□□ -1.52
USP39-211ENST00000465282 H3BS24 57 aa5.54□□□□□ -1.52
USP39-211ENST00000465282 LCE1DQ5T752 114 aa5.49□□□□□ -1.53
USP39-211ENST00000465282 KRTAP5-4Q6L8H1 288 aa5.49□□□□□ -1.53
USP39-211ENST00000465282 AHNAK2Q8IVF2 5795 aa5.45□□□□□ -1.54
USP39-211ENST00000465282 HMCN1Q96RW7 5635 aa5.45□□□□□ -1.54
USP39-211ENST00000465282 KRTAP4-12Q9BQ66 201 aa5.44□□□□□ -1.54
USP39-211ENST00000465282 KRTAP5-5Q701N2 237 aaPredicted RBP5.43□□□□□ -1.54
USP39-211ENST00000465282 MT4P47944 62 aa5.41□□□□□ -1.54
USP39-211ENST00000465282 KRTAP5-10Q6L8G5 202 aa5.31□□□□□ -1.56
USP39-211ENST00000465282 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
USP39-211ENST00000465282 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
USP39-211ENST00000465282 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
USP39-211ENST00000465282 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
USP39-211ENST00000465282 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
USP39-211ENST00000465282 KTN1-AS1Q86SY8 53 aa5.23□□□□□ -1.57
USP39-211ENST00000465282 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
USP39-211ENST00000465282 MT1AP04731 61 aa5.16□□□□□ -1.58
USP39-211ENST00000465282 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
USP39-211ENST00000465282 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
USP39-211ENST00000465282 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
USP39-211ENST00000465282 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.59
USP39-211ENST00000465282 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
USP39-211ENST00000465282 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
USP39-211ENST00000465282 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
USP39-211ENST00000465282 KRTAP6-2Q3LI66 62 aa4.8□□□□□ -1.64
USP39-211ENST00000465282 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
USP39-211ENST00000465282 MT3P25713 68 aa4.73□□□□□ -1.65
USP39-211ENST00000465282 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
USP39-211ENST00000465282 AHNAKQ09666 5890 aaKnown RBP4.63□□□□□ -1.67
USP39-211ENST00000465282 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
USP39-211ENST00000465282 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
USP39-211ENST00000465282 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
USP39-211ENST00000465282 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
USP39-211ENST00000465282 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
USP39-211ENST00000465282 LCE1EQ5T753 118 aa4.3□□□□□ -1.72
USP39-211ENST00000465282 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
USP39-211ENST00000465282 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.75
USP39-211ENST00000465282 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
USP39-211ENST00000465282 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
USP39-211ENST00000465282 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
USP39-211ENST00000465282 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
USP39-211ENST00000465282 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
USP39-211ENST00000465282 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
USP39-211ENST00000465282 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
USP39-211ENST00000465282 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
USP39-211ENST00000465282 INE1O15225 51 aa3.28□□□□□ -1.88
USP39-211ENST00000465282 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
USP39-211ENST00000465282 PRM1P04553 51 aa3.13□□□□□ -1.91
USP39-211ENST00000465282 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
USP39-211ENST00000465282 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
USP39-211ENST00000465282 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
USP39-211ENST00000465282 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 141.3 ms