RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
SSBP1-204ENST00000465167 S4R3F8 94 aa2.75□□□□□ -1.97
SSBP1-204ENST00000465167 KRTAP19-6Q3LI70 58 aa2.74□□□□□ -1.97
SSBP1-204ENST00000465167 A0A0D9SG42 100 aa2.71□□□□□ -1.98
SSBP1-204ENST00000465167 M0QZ58 72 aa2.7□□□□□ -1.98
SSBP1-204ENST00000465167 C10orf95Q9H7T3 257 aa2.7□□□□□ -1.98
SSBP1-204ENST00000465167 KRTAP13-4Q3LI77 160 aa2.68□□□□□ -1.98
SSBP1-204ENST00000465167 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
SSBP1-204ENST00000465167 FCGBPQ9Y6R7 5405 aaPredicted RBP2.66□□□□□ -1.98
SSBP1-204ENST00000465167 KRTAP12-1P59990 96 aa2.66□□□□□ -1.98
SSBP1-204ENST00000465167 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
SSBP1-204ENST00000465167 USH2AO75445 5202 aa2.65□□□□□ -1.99
SSBP1-204ENST00000465167 PLAC4Q8WY50 150 aa2.65□□□□□ -1.99
SSBP1-204ENST00000465167 SSPOA2VEC9 5147 aa2.61□□□□□ -1.99
SSBP1-204ENST00000465167 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
SSBP1-204ENST00000465167 SPRR2GQ9BYE4 73 aa2.57□□□□□ -2
SSBP1-204ENST00000465167 MT1BP07438 61 aa2.56□□□□□ -2
SSBP1-204ENST00000465167 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
SSBP1-204ENST00000465167 MACF1Q9UPN3 7388 aaKnown RBP2.55□□□□□ -2
SSBP1-204ENST00000465167 PRO2289Q9P1D8 64 aa2.53□□□□□ -2
SSBP1-204ENST00000465167 OBSCNQ5VST9 7968 aa2.53□□□□□ -2
SSBP1-204ENST00000465167 R4GN34 69 aa2.52□□□□□ -2.01
SSBP1-204ENST00000465167 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
SSBP1-204ENST00000465167 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
SSBP1-204ENST00000465167 INE1O15225 51 aa2.48□□□□□ -2.01
SSBP1-204ENST00000465167 SPRR2EP22531 72 aa2.46□□□□□ -2.02
SSBP1-204ENST00000465167 SPRR2BP35325 72 aa2.46□□□□□ -2.02
SSBP1-204ENST00000465167 SPRR2AP35326 72 aa2.46□□□□□ -2.02
SSBP1-204ENST00000465167 KRTAP2-3P0C7H8 128 aa2.45□□□□□ -2.02
SSBP1-204ENST00000465167 SPRR2FQ96RM1 72 aa2.45□□□□□ -2.02
SSBP1-204ENST00000465167 KRTAP2-4Q9BYR9 128 aa2.45□□□□□ -2.02
SSBP1-204ENST00000465167 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
SSBP1-204ENST00000465167 KRTAP8-1Q8IUC2 63 aa2.43□□□□□ -2.02
SSBP1-204ENST00000465167 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
SSBP1-204ENST00000465167 TNP1P09430 55 aa2.42□□□□□ -2.02
SSBP1-204ENST00000465167 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
SSBP1-204ENST00000465167 MT1XP80297 61 aa2.39□□□□□ -2.03
SSBP1-204ENST00000465167 KRTAP4-3Q9BYR4 195 aa2.38□□□□□ -2.03
SSBP1-204ENST00000465167 NEBP20929 6669 aa2.37□□□□□ -2.03
SSBP1-204ENST00000465167 SPRR2DP22532 72 aa2.37□□□□□ -2.03
SSBP1-204ENST00000465167 KRTAP2-1Q9BYU5 128 aa2.37□□□□□ -2.03
SSBP1-204ENST00000465167 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
SSBP1-204ENST00000465167 KMT2DO14686 5537 aa2.3□□□□□ -2.04
SSBP1-204ENST00000465167 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
SSBP1-204ENST00000465167 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
SSBP1-204ENST00000465167 KRTAP19-3Q7Z4W3 81 aa2.16□□□□□ -2.06
SSBP1-204ENST00000465167 MT1EP04732 61 aa2.13□□□□□ -2.07
SSBP1-204ENST00000465167 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
SSBP1-204ENST00000465167 MT1GP13640 62 aa2.1□□□□□ -2.07
SSBP1-204ENST00000465167 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
SSBP1-204ENST00000465167 KRTAP19-5Q3LI72 72 aa2.09□□□□□ -2.07
SSBP1-204ENST00000465167 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
SSBP1-204ENST00000465167 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
SSBP1-204ENST00000465167 MT4P47944 62 aa2.07□□□□□ -2.08
SSBP1-204ENST00000465167 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
SSBP1-204ENST00000465167 MT1MQ8N339 61 aa2.04□□□□□ -2.08
SSBP1-204ENST00000465167 MT1LQ93083 61 aa2.02□□□□□ -2.09
SSBP1-204ENST00000465167 DSTQ03001 7570 aaKnown RBP1.97□□□□□ -2.09
SSBP1-204ENST00000465167 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
SSBP1-204ENST00000465167 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
SSBP1-204ENST00000465167 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
SSBP1-204ENST00000465167 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
SSBP1-204ENST00000465167 KRTAP20-2Q3LI61 65 aa1.89□□□□□ -2.11
SSBP1-204ENST00000465167 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
SSBP1-204ENST00000465167 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
SSBP1-204ENST00000465167 MT1AP04731 61 aa1.74□□□□□ -2.13
SSBP1-204ENST00000465167 KRTAP6-1Q3LI64 71 aa1.71□□□□□ -2.14
SSBP1-204ENST00000465167 KRTAP6-2Q3LI66 62 aa1.66□□□□□ -2.14
SSBP1-204ENST00000465167 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
SSBP1-204ENST00000465167 SYNE1Q8NF91 8797 aaKnown RBP1.59□□□□□ -2.16
SSBP1-204ENST00000465167 PRM1P04553 51 aa1.54□□□□□ -2.16
SSBP1-204ENST00000465167 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
SSBP1-204ENST00000465167 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
SSBP1-204ENST00000465167 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
SSBP1-204ENST00000465167 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
SSBP1-204ENST00000465167 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
SSBP1-204ENST00000465167 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
SSBP1-204ENST00000465167 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 7.4 ms