RNA–Protein interactions for RNA: ENST00000465108.5

UBA3-207, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 804 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-207ENST00000465108 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
UBA3-207ENST00000465108 NEBP20929 6669 aa5.35□□□□□ -1.55
UBA3-207ENST00000465108 SPRR2EP22531 72 aa5.33□□□□□ -1.56
UBA3-207ENST00000465108 SPRR2BP35325 72 aa5.33□□□□□ -1.56
UBA3-207ENST00000465108 SPRR2AP35326 72 aa5.33□□□□□ -1.56
UBA3-207ENST00000465108 TNP1P09430 55 aa5.31□□□□□ -1.56
UBA3-207ENST00000465108 MDN1Q9NU22 5596 aa5.3□□□□□ -1.56
UBA3-207ENST00000465108 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
UBA3-207ENST00000465108 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
UBA3-207ENST00000465108 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
UBA3-207ENST00000465108 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
UBA3-207ENST00000465108 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
UBA3-207ENST00000465108 SPRR2DP22532 72 aa5.14□□□□□ -1.59
UBA3-207ENST00000465108 MT1EP04732 61 aa5.13□□□□□ -1.59
UBA3-207ENST00000465108 CDC42SE1Q9NRR8 79 aa5.13□□□□□ -1.59
UBA3-207ENST00000465108 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
UBA3-207ENST00000465108 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
UBA3-207ENST00000465108 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
UBA3-207ENST00000465108 KRTAP19-3Q7Z4W3 81 aa5.04□□□□□ -1.6
UBA3-207ENST00000465108 ROMO1P60602 79 aa5□□□□□ -1.61
UBA3-207ENST00000465108 KRTAP12-3P60328 96 aa4.97□□□□□ -1.61
UBA3-207ENST00000465108 MT1GP13640 62 aa4.95□□□□□ -1.62
UBA3-207ENST00000465108 MT1LQ93083 61 aa4.95□□□□□ -1.62
UBA3-207ENST00000465108 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
UBA3-207ENST00000465108 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
UBA3-207ENST00000465108 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
UBA3-207ENST00000465108 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
UBA3-207ENST00000465108 MT1MQ8N339 61 aa4.87□□□□□ -1.63
UBA3-207ENST00000465108 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
UBA3-207ENST00000465108 MT3P25713 68 aa4.78□□□□□ -1.64
UBA3-207ENST00000465108 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
UBA3-207ENST00000465108 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
UBA3-207ENST00000465108 PMAIP1Q13794 54 aa4.61□□□□□ -1.67
UBA3-207ENST00000465108 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
UBA3-207ENST00000465108 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
UBA3-207ENST00000465108 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
UBA3-207ENST00000465108 MT4P47944 62 aa4.5□□□□□ -1.69
UBA3-207ENST00000465108 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
UBA3-207ENST00000465108 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
UBA3-207ENST00000465108 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
UBA3-207ENST00000465108 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.71
UBA3-207ENST00000465108 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
UBA3-207ENST00000465108 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
UBA3-207ENST00000465108 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
UBA3-207ENST00000465108 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
UBA3-207ENST00000465108 MT1AP04731 61 aa4.22□□□□□ -1.73
UBA3-207ENST00000465108 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
UBA3-207ENST00000465108 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
UBA3-207ENST00000465108 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
UBA3-207ENST00000465108 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
UBA3-207ENST00000465108 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
UBA3-207ENST00000465108 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
UBA3-207ENST00000465108 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
UBA3-207ENST00000465108 GPR98Q8WXG9 6306 aa4.11□□□□□ -1.75
UBA3-207ENST00000465108 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
UBA3-207ENST00000465108 KRTAP5-10Q6L8G5 202 aa3.98□□□□□ -1.77
UBA3-207ENST00000465108 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
UBA3-207ENST00000465108 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
UBA3-207ENST00000465108 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
UBA3-207ENST00000465108 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
UBA3-207ENST00000465108 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
UBA3-207ENST00000465108 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
UBA3-207ENST00000465108 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
UBA3-207ENST00000465108 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
UBA3-207ENST00000465108 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
UBA3-207ENST00000465108 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
UBA3-207ENST00000465108 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
UBA3-207ENST00000465108 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
UBA3-207ENST00000465108 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
UBA3-207ENST00000465108 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
UBA3-207ENST00000465108 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
UBA3-207ENST00000465108 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
UBA3-207ENST00000465108 INE1O15225 51 aa2.58□□□□□ -2
UBA3-207ENST00000465108 PRM1P04553 51 aa2.58□□□□□ -2
UBA3-207ENST00000465108 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
UBA3-207ENST00000465108 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
UBA3-207ENST00000465108 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
UBA3-207ENST00000465108 MUC16Q8WXI7 14507 aa1.58□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms