RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 SMIM20Q8N5G0 67 aa1.42□□□□□ -2.18
PRKD3-206ENST00000464552 SYNE2Q8WXH0 6885 aaKnown RBP1.42□□□□□ -2.18
PRKD3-206ENST00000464552 ACYP2P14621 99 aa1.41□□□□□ -2.18
PRKD3-206ENST00000464552 DMAC1Q96GE9 116 aa1.41□□□□□ -2.18
PRKD3-206ENST00000464552 TRAV7A0A075B6U4 112 aa1.4□□□□□ -2.19
PRKD3-206ENST00000464552 PSPHP1O15172 72 aa1.4□□□□□ -2.19
PRKD3-206ENST00000464552 SNURFQ9Y675 71 aa1.38□□□□□ -2.19
PRKD3-206ENST00000464552 KRTAP20-1Q3LI63 56 aa1.36□□□□□ -2.19
PRKD3-206ENST00000464552 PRO0628Q9UI54 55 aa1.36□□□□□ -2.19
PRKD3-206ENST00000464552 KRTAP8-1Q8IUC2 63 aa1.35□□□□□ -2.19
PRKD3-206ENST00000464552 SPRR2FQ96RM1 72 aa1.35□□□□□ -2.19
PRKD3-206ENST00000464552 MUC12Q9UKN1 5478 aa1.35□□□□□ -2.19
PRKD3-206ENST00000464552 NEBP20929 6669 aa1.34□□□□□ -2.19
PRKD3-206ENST00000464552 SPRR2EP22531 72 aa1.34□□□□□ -2.19
PRKD3-206ENST00000464552 SPRR2BP35325 72 aa1.34□□□□□ -2.19
PRKD3-206ENST00000464552 SPRR2AP35326 72 aa1.34□□□□□ -2.19
PRKD3-206ENST00000464552 SERP2Q8N6R1 65 aa1.34□□□□□ -2.19
PRKD3-206ENST00000464552 SERP1Q9Y6X1 66 aa1.34□□□□□ -2.19
PRKD3-206ENST00000464552 MT1XP80297 61 aa1.33□□□□□ -2.2
PRKD3-206ENST00000464552 KRTAP25-1Q3LHN0 102 aa1.33□□□□□ -2.2
PRKD3-206ENST00000464552 COA5Q86WW8 74 aa1.32□□□□□ -2.2
PRKD3-206ENST00000464552 A0A0D9SG42 100 aa1.31□□□□□ -2.2
PRKD3-206ENST00000464552 MDN1Q9NU22 5596 aa1.3□□□□□ -2.2
PRKD3-206ENST00000464552 KRTAP2-3P0C7H8 128 aa1.3□□□□□ -2.2
PRKD3-206ENST00000464552 COX7CP15954 63 aa1.3□□□□□ -2.2
PRKD3-206ENST00000464552 SPRR2DP22532 72 aa1.3□□□□□ -2.2
PRKD3-206ENST00000464552 KRTAP2-4Q9BYR9 128 aa1.3□□□□□ -2.2
PRKD3-206ENST00000464552 KMT2DO14686 5537 aa1.3□□□□□ -2.2
PRKD3-206ENST00000464552 ANAPC13Q9BS18 74 aa1.29□□□□□ -2.2
PRKD3-206ENST00000464552 GPR98Q8WXG9 6306 aa1.28□□□□□ -2.2
PRKD3-206ENST00000464552 A0A1B0GU33 70 aa1.28□□□□□ -2.2
PRKD3-206ENST00000464552 A0A1B0GU69 56 aa1.28□□□□□ -2.2
PRKD3-206ENST00000464552 PRR15LQ9BU68 103 aa1.28□□□□□ -2.2
PRKD3-206ENST00000464552 K7ERS5 55 aa1.26□□□□□ -2.21
PRKD3-206ENST00000464552 ATP5EP56381 51 aaPredicted RBP1.26□□□□□ -2.21
PRKD3-206ENST00000464552 SPATA8Q6RVD6 105 aa1.26□□□□□ -2.21
PRKD3-206ENST00000464552 H7BZZ5 65 aa1.25□□□□□ -2.21
PRKD3-206ENST00000464552 KRTAP2-1Q9BYU5 128 aa1.25□□□□□ -2.21
PRKD3-206ENST00000464552 TNP1P09430 55 aa1.22□□□□□ -2.21
PRKD3-206ENST00000464552 CYSTM1Q9H1C7 97 aa1.22□□□□□ -2.21
PRKD3-206ENST00000464552 CCDC179H3BU77 68 aa1.21□□□□□ -2.22
PRKD3-206ENST00000464552 TMEM258P61165 79 aa1.21□□□□□ -2.22
PRKD3-206ENST00000464552 UQCR11O14957 56 aa1.2□□□□□ -2.22
PRKD3-206ENST00000464552 DSTQ03001 7570 aaKnown RBP1.19□□□□□ -2.22
PRKD3-206ENST00000464552 A6NED7 52 aa1.19□□□□□ -2.22
PRKD3-206ENST00000464552 MT1EP04732 61 aa1.19□□□□□ -2.22
PRKD3-206ENST00000464552 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
PRKD3-206ENST00000464552 KRTAP19-5Q3LI72 72 aa1.18□□□□□ -2.22
PRKD3-206ENST00000464552 LINC01558Q9Y6Z2 57 aa1.18□□□□□ -2.22
PRKD3-206ENST00000464552 MIR22HGQ0VDD5 57 aa1.17□□□□□ -2.22
PRKD3-206ENST00000464552 KRTAP19-7Q3SYF9 63 aa1.17□□□□□ -2.22
PRKD3-206ENST00000464552 C10orf95Q9H7T3 257 aa1.17□□□□□ -2.22
PRKD3-206ENST00000464552 MT1GP13640 62 aa1.16□□□□□ -2.22
PRKD3-206ENST00000464552 MT1MQ8N339 61 aa1.14□□□□□ -2.23
PRKD3-206ENST00000464552 MT1LQ93083 61 aa1.14□□□□□ -2.23
PRKD3-206ENST00000464552 MT4P47944 62 aa1.13□□□□□ -2.23
PRKD3-206ENST00000464552 CDC42SE1Q9NRR8 79 aa1.11□□□□□ -2.23
PRKD3-206ENST00000464552 Q1T7F1 81 aa1.1□□□□□ -2.23
PRKD3-206ENST00000464552 RPS28P62857 69 aaKnown RBP1.08□□□□□ -2.24
PRKD3-206ENST00000464552 PMAIP1Q13794 54 aa1.08□□□□□ -2.24
PRKD3-206ENST00000464552 ROMO1P60602 79 aa1.07□□□□□ -2.24
PRKD3-206ENST00000464552 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
PRKD3-206ENST00000464552 KRTAP20-2Q3LI61 65 aa1.03□□□□□ -2.24
PRKD3-206ENST00000464552 SYNE1Q8NF91 8797 aaKnown RBP1.02□□□□□ -2.25
PRKD3-206ENST00000464552 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
PRKD3-206ENST00000464552 KTN1-AS1Q86SY8 53 aa1□□□□□ -2.25
PRKD3-206ENST00000464552 MT1AP04731 61 aa0.98□□□□□ -2.25
PRKD3-206ENST00000464552 BRK1Q8WUW1 75 aa0.98□□□□□ -2.25
PRKD3-206ENST00000464552 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
PRKD3-206ENST00000464552 KRTAP6-1Q3LI64 71 aa0.95□□□□□ -2.26
PRKD3-206ENST00000464552 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
PRKD3-206ENST00000464552 KRTAP6-2Q3LI66 62 aa0.93□□□□□ -2.26
PRKD3-206ENST00000464552 MUC5BQ9HC84 5762 aaPredicted RBP0.93□□□□□ -2.26
PRKD3-206ENST00000464552 MUC5ACP98088 5654 aa0.86□□□□□ -2.27
PRKD3-206ENST00000464552 INE1O15225 51 aa0.77□□□□□ -2.29
PRKD3-206ENST00000464552 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
PRKD3-206ENST00000464552 PRM1P04553 51 aa0.54□□□□□ -2.32
PRKD3-206ENST00000464552 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms