RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 KRTAP2-3P0C7H8 128 aa9.2□□□□□ -0.94
PAXBP1-206ENST00000464256 KRTAP2-4Q9BYR9 128 aa9.2□□□□□ -0.94
PAXBP1-206ENST00000464256 KRTAP19-3Q7Z4W3 81 aa9.2□□□□□ -0.94
PAXBP1-206ENST00000464256 KRTAP25-1Q3LHN0 102 aa9.17□□□□□ -0.94
PAXBP1-206ENST00000464256 LCE5AQ5TCM9 118 aa9.16□□□□□ -0.94
PAXBP1-206ENST00000464256 MT1LQ93083 61 aa9.07□□□□□ -0.96
PAXBP1-206ENST00000464256 DSTQ03001 7570 aaKnown RBP9.04□□□□□ -0.96
PAXBP1-206ENST00000464256 LCE3BQ5TA77 95 aa9.03□□□□□ -0.96
PAXBP1-206ENST00000464256 KRTAP12-3P60328 96 aa9.01□□□□□ -0.97
PAXBP1-206ENST00000464256 MT1GP13640 62 aa8.98□□□□□ -0.97
PAXBP1-206ENST00000464256 KTN1-AS1Q86SY8 53 aa8.97□□□□□ -0.97
PAXBP1-206ENST00000464256 KRTAP2-2Q9BYT5 123 aa8.94□□□□□ -0.98
PAXBP1-206ENST00000464256 KRTAP2-1Q9BYU5 128 aa8.94□□□□□ -0.98
PAXBP1-206ENST00000464256 MT1MQ8N339 61 aa8.92□□□□□ -0.98
PAXBP1-206ENST00000464256 PP632Q6XCG6 107 aa8.85□□□□□ -0.99
PAXBP1-206ENST00000464256 KRTAP23-1A1A580 65 aa8.82□□□□□ -1
PAXBP1-206ENST00000464256 KRTAP4-3Q9BYR4 195 aa8.81□□□□□ -1
PAXBP1-206ENST00000464256 PRAC1Q96KF2 57 aa8.78□□□□□ -1
PAXBP1-206ENST00000464256 KRTAP4-7Q9BYR0 210 aa8.77□□□□□ -1.01
PAXBP1-206ENST00000464256 SVIPQ8NHG7 77 aa8.59□□□□□ -1.03
PAXBP1-206ENST00000464256 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
PAXBP1-206ENST00000464256 KRTAP4-9Q9BYQ8 210 aa8.37□□□□□ -1.07
PAXBP1-206ENST00000464256 LCE3CQ5T5A8 94 aa8.34□□□□□ -1.07
PAXBP1-206ENST00000464256 KRTAP19-4Q3LI73 84 aa8.3□□□□□ -1.08
PAXBP1-206ENST00000464256 LOC100996750A0A140TA64 210 aa8.28□□□□□ -1.08
PAXBP1-206ENST00000464256 KRTAP5-4Q6L8H1 288 aa8.2□□□□□ -1.1
PAXBP1-206ENST00000464256 LCE4AQ5TA78 99 aa8.19□□□□□ -1.1
PAXBP1-206ENST00000464256 LCE1DQ5T752 114 aa8.18□□□□□ -1.1
PAXBP1-206ENST00000464256 MT4P47944 62 aa8.18□□□□□ -1.1
PAXBP1-206ENST00000464256 KRTAP5-5Q701N2 237 aaPredicted RBP8.14□□□□□ -1.11
PAXBP1-206ENST00000464256 HMCN1Q96RW7 5635 aa8.13□□□□□ -1.11
PAXBP1-206ENST00000464256 KRTAP4-6Q9BYQ5 205 aa8.02□□□□□ -1.13
PAXBP1-206ENST00000464256 KRTAP9-6A8MVA2 160 aa8□□□□□ -1.13
PAXBP1-206ENST00000464256 SYNE1Q8NF91 8797 aaKnown RBP7.92□□□□□ -1.14
PAXBP1-206ENST00000464256 KRTAP20-2Q3LI61 65 aa7.73□□□□□ -1.17
PAXBP1-206ENST00000464256 KRTAP12-4P60329 112 aa7.7□□□□□ -1.18
PAXBP1-206ENST00000464256 KRTAP6-1Q3LI64 71 aa7.7□□□□□ -1.18
PAXBP1-206ENST00000464256 MT1AP04731 61 aa7.68□□□□□ -1.18
PAXBP1-206ENST00000464256 SPRR5A0A1B0GTR4 108 aa7.65□□□□□ -1.18
PAXBP1-206ENST00000464256 AHNAK2Q8IVF2 5795 aa7.65□□□□□ -1.19
PAXBP1-206ENST00000464256 GPR98Q8WXG9 6306 aa7.63□□□□□ -1.19
PAXBP1-206ENST00000464256 KRTAP5-3Q6L8H2 238 aa7.49□□□□□ -1.21
PAXBP1-206ENST00000464256 KRTAP9-4Q9BYQ2 154 aa7.38□□□□□ -1.23
PAXBP1-206ENST00000464256 KRTAP5-10Q6L8G5 202 aa7.34□□□□□ -1.23
PAXBP1-206ENST00000464256 LUZP6Q538Z0 58 aa7.31□□□□□ -1.24
PAXBP1-206ENST00000464256 KRTAP5-2Q701N4 177 aa7.28□□□□□ -1.24
PAXBP1-206ENST00000464256 KRTAP6-2Q3LI66 62 aa7.24□□□□□ -1.25
PAXBP1-206ENST00000464256 OBSCNQ5VST9 7968 aa6.96□□□□□ -1.3
PAXBP1-206ENST00000464256 MT3P25713 68 aa6.96□□□□□ -1.3
PAXBP1-206ENST00000464256 KRTAP5-7Q6L8G8 165 aa6.93□□□□□ -1.3
PAXBP1-206ENST00000464256 NDUFAF8A1L188 74 aa6.92□□□□□ -1.3
PAXBP1-206ENST00000464256 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
PAXBP1-206ENST00000464256 KRTAP5-8O75690 187 aa6.71□□□□□ -1.33
PAXBP1-206ENST00000464256 KRTAP5-1Q6L8H4 278 aa6.46□□□□□ -1.37
PAXBP1-206ENST00000464256 MUC5ACP98088 5654 aa6.39□□□□□ -1.39
PAXBP1-206ENST00000464256 LCE1EQ5T753 118 aa6.24□□□□□ -1.41
PAXBP1-206ENST00000464256 MUC5BQ9HC84 5762 aaPredicted RBP6.24□□□□□ -1.41
PAXBP1-206ENST00000464256 KRTAP9-9Q9BYP9 154 aa6.19□□□□□ -1.42
PAXBP1-206ENST00000464256 A0A0A0MQY5 61 aa6.1□□□□□ -1.43
PAXBP1-206ENST00000464256 AHNAKQ09666 5890 aaKnown RBP6.09□□□□□ -1.43
PAXBP1-206ENST00000464256 LCE3DQ9BYE3 92 aa6.08□□□□□ -1.44
PAXBP1-206ENST00000464256 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
PAXBP1-206ENST00000464256 LCE1BQ5T7P3 118 aa5.96□□□□□ -1.46
PAXBP1-206ENST00000464256 H3BS24 57 aa5.93□□□□□ -1.46
PAXBP1-206ENST00000464256 LCE1CQ5T751 118 aa5.83□□□□□ -1.48
PAXBP1-206ENST00000464256 LCE3EQ5T5B0 92 aa5.79□□□□□ -1.48
PAXBP1-206ENST00000464256 INE1O15225 51 aa5.76□□□□□ -1.49
PAXBP1-206ENST00000464256 KRTAP4-12Q9BQ66 201 aa5.65□□□□□ -1.51
PAXBP1-206ENST00000464256 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.36□□□□□ -1.55
PAXBP1-206ENST00000464256 KRTAP5-11Q6L8G4 156 aa5.24□□□□□ -1.57
PAXBP1-206ENST00000464256 KRTAP21-2Q3LI59 83 aa5.05□□□□□ -1.6
PAXBP1-206ENST00000464256 LCE1FQ5T754 118 aa4.91□□□□□ -1.62
PAXBP1-206ENST00000464256 PRM1P04553 51 aa4.8□□□□□ -1.64
PAXBP1-206ENST00000464256 KRTAP4-4Q9BYR3 166 aa4.64□□□□□ -1.67
PAXBP1-206ENST00000464256 PHGR1C9JFL3 82 aa4.54□□□□□ -1.68
PAXBP1-206ENST00000464256 MUC19Q7Z5P9 8384 aa4.26□□□□□ -1.73
PAXBP1-206ENST00000464256 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
PAXBP1-206ENST00000464256 MUC16Q8WXI7 14507 aa2.94□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 62 ms