RNA–Protein interactions for RNA: ENST00000464255.1

CTDSP1-206, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-206ENST00000464255 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.63
CTDSP1-206ENST00000464255 DSTQ03001 7570 aaKnown RBP4.84□□□□□ -1.64
CTDSP1-206ENST00000464255 SPINT4Q6UDR6 99 aa4.8□□□□□ -1.64
CTDSP1-206ENST00000464255 UQCR11O14957 56 aa4.79□□□□□ -1.64
CTDSP1-206ENST00000464255 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
CTDSP1-206ENST00000464255 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
CTDSP1-206ENST00000464255 KRTAP4-9Q9BYQ8 210 aa4.72□□□□□ -1.65
CTDSP1-206ENST00000464255 MT1GP13640 62 aa4.71□□□□□ -1.66
CTDSP1-206ENST00000464255 MT1MQ8N339 61 aa4.66□□□□□ -1.66
CTDSP1-206ENST00000464255 MT1LQ93083 61 aa4.66□□□□□ -1.66
CTDSP1-206ENST00000464255 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
CTDSP1-206ENST00000464255 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
CTDSP1-206ENST00000464255 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
CTDSP1-206ENST00000464255 HMCN1Q96RW7 5635 aa4.61□□□□□ -1.67
CTDSP1-206ENST00000464255 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
CTDSP1-206ENST00000464255 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
CTDSP1-206ENST00000464255 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
CTDSP1-206ENST00000464255 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
CTDSP1-206ENST00000464255 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
CTDSP1-206ENST00000464255 TNP1P09430 55 aa4.55□□□□□ -1.68
CTDSP1-206ENST00000464255 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
CTDSP1-206ENST00000464255 KRTAP5-7Q6L8G8 165 aa4.54□□□□□ -1.68
CTDSP1-206ENST00000464255 MT4P47944 62 aa4.51□□□□□ -1.69
CTDSP1-206ENST00000464255 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
CTDSP1-206ENST00000464255 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
CTDSP1-206ENST00000464255 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
CTDSP1-206ENST00000464255 K7ERS5 55 aa4.46□□□□□ -1.7
CTDSP1-206ENST00000464255 KRTAP12-3P60328 96 aa4.43□□□□□ -1.7
CTDSP1-206ENST00000464255 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
CTDSP1-206ENST00000464255 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
CTDSP1-206ENST00000464255 ROMO1P60602 79 aa4.38□□□□□ -1.71
CTDSP1-206ENST00000464255 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
CTDSP1-206ENST00000464255 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
CTDSP1-206ENST00000464255 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
CTDSP1-206ENST00000464255 KRTAP20-2Q3LI61 65 aa4.23□□□□□ -1.73
CTDSP1-206ENST00000464255 H3BS24 57 aa4.18□□□□□ -1.74
CTDSP1-206ENST00000464255 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
CTDSP1-206ENST00000464255 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
CTDSP1-206ENST00000464255 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
CTDSP1-206ENST00000464255 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
CTDSP1-206ENST00000464255 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
CTDSP1-206ENST00000464255 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
CTDSP1-206ENST00000464255 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
CTDSP1-206ENST00000464255 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
CTDSP1-206ENST00000464255 MT1AP04731 61 aa3.95□□□□□ -1.78
CTDSP1-206ENST00000464255 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
CTDSP1-206ENST00000464255 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
CTDSP1-206ENST00000464255 MUC5ACP98088 5654 aa3.93□□□□□ -1.78
CTDSP1-206ENST00000464255 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
CTDSP1-206ENST00000464255 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
CTDSP1-206ENST00000464255 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
CTDSP1-206ENST00000464255 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.8
CTDSP1-206ENST00000464255 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
CTDSP1-206ENST00000464255 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
CTDSP1-206ENST00000464255 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
CTDSP1-206ENST00000464255 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
CTDSP1-206ENST00000464255 MT3P25713 68 aa3.6□□□□□ -1.83
CTDSP1-206ENST00000464255 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
CTDSP1-206ENST00000464255 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
CTDSP1-206ENST00000464255 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
CTDSP1-206ENST00000464255 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
CTDSP1-206ENST00000464255 INE1O15225 51 aa3.32□□□□□ -1.88
CTDSP1-206ENST00000464255 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
CTDSP1-206ENST00000464255 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
CTDSP1-206ENST00000464255 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
CTDSP1-206ENST00000464255 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
CTDSP1-206ENST00000464255 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
CTDSP1-206ENST00000464255 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
CTDSP1-206ENST00000464255 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
CTDSP1-206ENST00000464255 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
CTDSP1-206ENST00000464255 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
CTDSP1-206ENST00000464255 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
CTDSP1-206ENST00000464255 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
CTDSP1-206ENST00000464255 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
CTDSP1-206ENST00000464255 PRM1P04553 51 aa2.29□□□□□ -2.04
CTDSP1-206ENST00000464255 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
CTDSP1-206ENST00000464255 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
CTDSP1-206ENST00000464255 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms