RNA–Protein interactions for RNA: ENST00000463880.1

ARF4-202, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-202ENST00000463880 LCE3BQ5TA77 95 aa7.48□□□□□ -1.21
ARF4-202ENST00000463880 KRTAP2-2Q9BYT5 123 aa7.46□□□□□ -1.22
ARF4-202ENST00000463880 KRTAP2-1Q9BYU5 128 aa7.46□□□□□ -1.22
ARF4-202ENST00000463880 CDC42SE1Q9NRR8 79 aa7.44□□□□□ -1.22
ARF4-202ENST00000463880 MT1LQ93083 61 aa7.41□□□□□ -1.22
ARF4-202ENST00000463880 MT1GP13640 62 aa7.4□□□□□ -1.22
ARF4-202ENST00000463880 KRTAP12-3P60328 96 aa7.37□□□□□ -1.23
ARF4-202ENST00000463880 PP632Q6XCG6 107 aa7.34□□□□□ -1.23
ARF4-202ENST00000463880 ROMO1P60602 79 aa7.3□□□□□ -1.24
ARF4-202ENST00000463880 MT1MQ8N339 61 aa7.3□□□□□ -1.24
ARF4-202ENST00000463880 DSTQ03001 7570 aaKnown RBP7.25□□□□□ -1.25
ARF4-202ENST00000463880 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
ARF4-202ENST00000463880 KRTAP4-3Q9BYR4 195 aa7.18□□□□□ -1.26
ARF4-202ENST00000463880 KRTAP4-7Q9BYR0 210 aa7.12□□□□□ -1.27
ARF4-202ENST00000463880 BRK1Q8WUW1 75 aa7.06□□□□□ -1.28
ARF4-202ENST00000463880 KRTAP15-1Q3LI76 137 aa6.99□□□□□ -1.29
ARF4-202ENST00000463880 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
ARF4-202ENST00000463880 KRTAP4-6Q9BYQ5 205 aa6.93□□□□□ -1.3
ARF4-202ENST00000463880 KRTAP4-9Q9BYQ8 210 aa6.91□□□□□ -1.3
ARF4-202ENST00000463880 KRTAP19-4Q3LI73 84 aa6.85□□□□□ -1.31
ARF4-202ENST00000463880 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
ARF4-202ENST00000463880 LCE4AQ5TA78 99 aa6.81□□□□□ -1.32
ARF4-202ENST00000463880 MT4P47944 62 aa6.77□□□□□ -1.33
ARF4-202ENST00000463880 LCE1DQ5T752 114 aa6.75□□□□□ -1.33
ARF4-202ENST00000463880 GPR98Q8WXG9 6306 aa6.72□□□□□ -1.33
ARF4-202ENST00000463880 KRTAP5-4Q6L8H1 288 aa6.71□□□□□ -1.34
ARF4-202ENST00000463880 PMAIP1Q13794 54 aa6.63□□□□□ -1.35
ARF4-202ENST00000463880 KRTAP5-5Q701N2 237 aaPredicted RBP6.62□□□□□ -1.35
ARF4-202ENST00000463880 HMCN1Q96RW7 5635 aa6.54□□□□□ -1.36
ARF4-202ENST00000463880 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
ARF4-202ENST00000463880 KRTAP12-4P60329 112 aa6.4□□□□□ -1.38
ARF4-202ENST00000463880 SYNE1Q8NF91 8797 aaKnown RBP6.38□□□□□ -1.39
ARF4-202ENST00000463880 PRAC1Q96KF2 57 aa6.37□□□□□ -1.39
ARF4-202ENST00000463880 KRTAP20-2Q3LI61 65 aa6.36□□□□□ -1.39
ARF4-202ENST00000463880 PRO0628Q9UI54 55 aa6.36□□□□□ -1.39
ARF4-202ENST00000463880 SPRR5A0A1B0GTR4 108 aa6.32□□□□□ -1.4
ARF4-202ENST00000463880 MT1AP04731 61 aa6.3□□□□□ -1.4
ARF4-202ENST00000463880 KRTAP6-1Q3LI64 71 aa6.27□□□□□ -1.41
ARF4-202ENST00000463880 AHNAK2Q8IVF2 5795 aa6.23□□□□□ -1.41
ARF4-202ENST00000463880 KRTAP5-3Q6L8H2 238 aa6.14□□□□□ -1.43
ARF4-202ENST00000463880 KRTAP5-10Q6L8G5 202 aa6.06□□□□□ -1.44
ARF4-202ENST00000463880 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
ARF4-202ENST00000463880 KTN1-AS1Q86SY8 53 aa6.03□□□□□ -1.44
ARF4-202ENST00000463880 KRTAP5-2Q701N4 177 aa5.94□□□□□ -1.46
ARF4-202ENST00000463880 KRTAP6-2Q3LI66 62 aa5.93□□□□□ -1.46
ARF4-202ENST00000463880 SVIPQ8NHG7 77 aa5.92□□□□□ -1.46
ARF4-202ENST00000463880 KRTAP4-12Q9BQ66 201 aa5.92□□□□□ -1.46
ARF4-202ENST00000463880 KRTAP5-7Q6L8G8 165 aa5.86□□□□□ -1.47
ARF4-202ENST00000463880 KRTAP9-9Q9BYP9 154 aa5.85□□□□□ -1.47
ARF4-202ENST00000463880 MT3P25713 68 aa5.75□□□□□ -1.49
ARF4-202ENST00000463880 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
ARF4-202ENST00000463880 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
ARF4-202ENST00000463880 KRTAP5-8O75690 187 aa5.52□□□□□ -1.53
ARF4-202ENST00000463880 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
ARF4-202ENST00000463880 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
ARF4-202ENST00000463880 KRTAP5-1Q6L8H4 278 aa5.28□□□□□ -1.56
ARF4-202ENST00000463880 AHNAKQ09666 5890 aaKnown RBP5.19□□□□□ -1.58
ARF4-202ENST00000463880 LCE1EQ5T753 118 aa5.14□□□□□ -1.59
ARF4-202ENST00000463880 MUC5ACP98088 5654 aa5.13□□□□□ -1.59
ARF4-202ENST00000463880 MUC5BQ9HC84 5762 aaPredicted RBP5.12□□□□□ -1.59
ARF4-202ENST00000463880 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
ARF4-202ENST00000463880 LCE1BQ5T7P3 118 aa4.94□□□□□ -1.62
ARF4-202ENST00000463880 H3BS24 57 aa4.78□□□□□ -1.64
ARF4-202ENST00000463880 LCE1CQ5T751 118 aa4.78□□□□□ -1.64
ARF4-202ENST00000463880 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
ARF4-202ENST00000463880 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
ARF4-202ENST00000463880 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
ARF4-202ENST00000463880 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
ARF4-202ENST00000463880 KRTAP5-11Q6L8G4 156 aa4.31□□□□□ -1.72
ARF4-202ENST00000463880 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
ARF4-202ENST00000463880 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
ARF4-202ENST00000463880 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
ARF4-202ENST00000463880 PRM1P04553 51 aa3.78□□□□□ -1.8
ARF4-202ENST00000463880 PHGR1C9JFL3 82 aa3.72□□□□□ -1.81
ARF4-202ENST00000463880 INE1O15225 51 aa3.64□□□□□ -1.83
ARF4-202ENST00000463880 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
ARF4-202ENST00000463880 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
ARF4-202ENST00000463880 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 146 ms