RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 CAMK2N1Q7Z7J9 78 aa4.47□□□□□ -1.69
SSR3-202ENST00000463503 A6NED7 52 aa4.46□□□□□ -1.7
SSR3-202ENST00000463503 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
SSR3-202ENST00000463503 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
SSR3-202ENST00000463503 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
SSR3-202ENST00000463503 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
SSR3-202ENST00000463503 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.71
SSR3-202ENST00000463503 K7ERS5 55 aa4.39□□□□□ -1.71
SSR3-202ENST00000463503 CDC42SE1Q9NRR8 79 aa4.39□□□□□ -1.71
SSR3-202ENST00000463503 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
SSR3-202ENST00000463503 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
SSR3-202ENST00000463503 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
SSR3-202ENST00000463503 C10orf95Q9H7T3 257 aa4.32□□□□□ -1.72
SSR3-202ENST00000463503 TNP1P09430 55 aa4.25□□□□□ -1.73
SSR3-202ENST00000463503 MT4P47944 62 aa4.24□□□□□ -1.73
SSR3-202ENST00000463503 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
SSR3-202ENST00000463503 KRTAP5-7Q6L8G8 165 aa4.23□□□□□ -1.73
SSR3-202ENST00000463503 KRTAP25-1Q3LHN0 102 aa4.2□□□□□ -1.74
SSR3-202ENST00000463503 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
SSR3-202ENST00000463503 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
SSR3-202ENST00000463503 BRK1Q8WUW1 75 aa4.18□□□□□ -1.74
SSR3-202ENST00000463503 KRTAP19-7Q3SYF9 63 aa4.16□□□□□ -1.74
SSR3-202ENST00000463503 ROMO1P60602 79 aa4.15□□□□□ -1.75
SSR3-202ENST00000463503 MT1EP04732 61 aa4.13□□□□□ -1.75
SSR3-202ENST00000463503 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
SSR3-202ENST00000463503 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
SSR3-202ENST00000463503 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.75
SSR3-202ENST00000463503 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
SSR3-202ENST00000463503 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
SSR3-202ENST00000463503 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
SSR3-202ENST00000463503 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
SSR3-202ENST00000463503 PRO0628Q9UI54 55 aa4□□□□□ -1.77
SSR3-202ENST00000463503 MT1GP13640 62 aa3.99□□□□□ -1.77
SSR3-202ENST00000463503 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
SSR3-202ENST00000463503 MT1MQ8N339 61 aa3.97□□□□□ -1.77
SSR3-202ENST00000463503 KRTAP12-3P60328 96 aa3.96□□□□□ -1.78
SSR3-202ENST00000463503 MT1LQ93083 61 aa3.9□□□□□ -1.79
SSR3-202ENST00000463503 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.79
SSR3-202ENST00000463503 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
SSR3-202ENST00000463503 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
SSR3-202ENST00000463503 SVIPQ8NHG7 77 aa3.8□□□□□ -1.8
SSR3-202ENST00000463503 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
SSR3-202ENST00000463503 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
SSR3-202ENST00000463503 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
SSR3-202ENST00000463503 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
SSR3-202ENST00000463503 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
SSR3-202ENST00000463503 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
SSR3-202ENST00000463503 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
SSR3-202ENST00000463503 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
SSR3-202ENST00000463503 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
SSR3-202ENST00000463503 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
SSR3-202ENST00000463503 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
SSR3-202ENST00000463503 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
SSR3-202ENST00000463503 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
SSR3-202ENST00000463503 MT1AP04731 61 aa3.34□□□□□ -1.87
SSR3-202ENST00000463503 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
SSR3-202ENST00000463503 MT3P25713 68 aa3.27□□□□□ -1.89
SSR3-202ENST00000463503 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
SSR3-202ENST00000463503 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
SSR3-202ENST00000463503 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
SSR3-202ENST00000463503 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
SSR3-202ENST00000463503 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
SSR3-202ENST00000463503 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
SSR3-202ENST00000463503 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
SSR3-202ENST00000463503 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
SSR3-202ENST00000463503 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
SSR3-202ENST00000463503 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
SSR3-202ENST00000463503 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
SSR3-202ENST00000463503 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
SSR3-202ENST00000463503 PHGR1C9JFL3 82 aa2.51□□□□□ -2.01
SSR3-202ENST00000463503 INE1O15225 51 aa2.38□□□□□ -2.03
SSR3-202ENST00000463503 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
SSR3-202ENST00000463503 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
SSR3-202ENST00000463503 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
SSR3-202ENST00000463503 PRM1P04553 51 aa2.11□□□□□ -2.07
SSR3-202ENST00000463503 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
SSR3-202ENST00000463503 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 97.4 ms