RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
SHQ1-203ENST00000463369 LCE3CQ5T5A8 94 aa3.48□□□□□ -1.85
SHQ1-203ENST00000463369 MT1BP07438 61 aa3.46□□□□□ -1.86
SHQ1-203ENST00000463369 USH2AO75445 5202 aa3.45□□□□□ -1.86
SHQ1-203ENST00000463369 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
SHQ1-203ENST00000463369 FSIP2Q5CZC0 6907 aa3.41□□□□□ -1.86
SHQ1-203ENST00000463369 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
SHQ1-203ENST00000463369 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
SHQ1-203ENST00000463369 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
SHQ1-203ENST00000463369 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.87
SHQ1-203ENST00000463369 MT1XP80297 61 aa3.32□□□□□ -1.88
SHQ1-203ENST00000463369 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
SHQ1-203ENST00000463369 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
SHQ1-203ENST00000463369 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
SHQ1-203ENST00000463369 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
SHQ1-203ENST00000463369 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
SHQ1-203ENST00000463369 KRTAP10-7P60409 375 aaPredicted RBP3.18□□□□□ -1.9
SHQ1-203ENST00000463369 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
SHQ1-203ENST00000463369 KMT2DO14686 5537 aa3.11□□□□□ -1.91
SHQ1-203ENST00000463369 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
SHQ1-203ENST00000463369 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
SHQ1-203ENST00000463369 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
SHQ1-203ENST00000463369 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
SHQ1-203ENST00000463369 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
SHQ1-203ENST00000463369 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
SHQ1-203ENST00000463369 KRTAP19-5Q3LI72 72 aa3.07□□□□□ -1.92
SHQ1-203ENST00000463369 KRTAP12-4P60329 112 aa3□□□□□ -1.93
SHQ1-203ENST00000463369 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
SHQ1-203ENST00000463369 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
SHQ1-203ENST00000463369 KRTAP5-9P26371 169 aa2.97□□□□□ -1.93
SHQ1-203ENST00000463369 KRTAP19-7Q3SYF9 63 aa2.97□□□□□ -1.93
SHQ1-203ENST00000463369 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
SHQ1-203ENST00000463369 MT1EP04732 61 aa2.92□□□□□ -1.94
SHQ1-203ENST00000463369 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
SHQ1-203ENST00000463369 MT1LQ93083 61 aa2.84□□□□□ -1.95
SHQ1-203ENST00000463369 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
SHQ1-203ENST00000463369 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
SHQ1-203ENST00000463369 SPRR2EP22531 72 aa2.82□□□□□ -1.96
SHQ1-203ENST00000463369 SPRR2BP35325 72 aa2.82□□□□□ -1.96
SHQ1-203ENST00000463369 SPRR2AP35326 72 aa2.82□□□□□ -1.96
SHQ1-203ENST00000463369 MT1GP13640 62 aa2.81□□□□□ -1.96
SHQ1-203ENST00000463369 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
SHQ1-203ENST00000463369 MT1MQ8N339 61 aa2.76□□□□□ -1.97
SHQ1-203ENST00000463369 NEBP20929 6669 aa2.75□□□□□ -1.97
SHQ1-203ENST00000463369 SPRR2DP22532 72 aa2.72□□□□□ -1.97
SHQ1-203ENST00000463369 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
SHQ1-203ENST00000463369 KRTAP20-1Q3LI63 56 aa2.67□□□□□ -1.98
SHQ1-203ENST00000463369 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
SHQ1-203ENST00000463369 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.98
SHQ1-203ENST00000463369 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
SHQ1-203ENST00000463369 MT1AP04731 61 aa2.54□□□□□ -2
SHQ1-203ENST00000463369 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
SHQ1-203ENST00000463369 KRTAP4-4Q9BYR3 166 aa2.53□□□□□ -2.01
SHQ1-203ENST00000463369 PRM1P04553 51 aa2.51□□□□□ -2.01
SHQ1-203ENST00000463369 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
SHQ1-203ENST00000463369 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
SHQ1-203ENST00000463369 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
SHQ1-203ENST00000463369 MT4P47944 62 aa2.35□□□□□ -2.03
SHQ1-203ENST00000463369 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
SHQ1-203ENST00000463369 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
SHQ1-203ENST00000463369 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
SHQ1-203ENST00000463369 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.05
SHQ1-203ENST00000463369 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
SHQ1-203ENST00000463369 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
SHQ1-203ENST00000463369 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
SHQ1-203ENST00000463369 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
SHQ1-203ENST00000463369 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
SHQ1-203ENST00000463369 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
SHQ1-203ENST00000463369 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
SHQ1-203ENST00000463369 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
SHQ1-203ENST00000463369 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
SHQ1-203ENST00000463369 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
SHQ1-203ENST00000463369 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
SHQ1-203ENST00000463369 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
SHQ1-203ENST00000463369 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
SHQ1-203ENST00000463369 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
SHQ1-203ENST00000463369 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 170.6 ms