RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 LCE1DQ5T752 114 aa7.28□□□□□ -1.24
VARS-221ENST00000463184 K7ERS5 55 aa7.24□□□□□ -1.25
VARS-221ENST00000463184 C10orf95Q9H7T3 257 aa7.24□□□□□ -1.25
VARS-221ENST00000463184 MT1GP13640 62 aa7.22□□□□□ -1.25
VARS-221ENST00000463184 LCE4AQ5TA78 99 aa7.2□□□□□ -1.26
VARS-221ENST00000463184 PP632Q6XCG6 107 aa7.17□□□□□ -1.26
VARS-221ENST00000463184 TNP1P09430 55 aa7.16□□□□□ -1.26
VARS-221ENST00000463184 MT4P47944 62 aa7.14□□□□□ -1.27
VARS-221ENST00000463184 KRTAP19-5Q3LI72 72 aa7.14□□□□□ -1.27
VARS-221ENST00000463184 HMCN1Q96RW7 5635 aa7.11□□□□□ -1.27
VARS-221ENST00000463184 MT1MQ8N339 61 aa7.06□□□□□ -1.28
VARS-221ENST00000463184 CDC42SE1Q9NRR8 79 aa7.05□□□□□ -1.28
VARS-221ENST00000463184 MT1LQ93083 61 aa7□□□□□ -1.29
VARS-221ENST00000463184 KRTAP5-4Q6L8H1 288 aa6.98□□□□□ -1.29
VARS-221ENST00000463184 KRTAP5-10Q6L8G5 202 aa6.97□□□□□ -1.29
VARS-221ENST00000463184 AHNAK2Q8IVF2 5795 aa6.97□□□□□ -1.29
VARS-221ENST00000463184 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.3
VARS-221ENST00000463184 LCE3AQ5TA76 89 aa6.96□□□□□ -1.3
VARS-221ENST00000463184 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.3
VARS-221ENST00000463184 KRTAP4-3Q9BYR4 195 aa6.88□□□□□ -1.31
VARS-221ENST00000463184 ROMO1P60602 79 aa6.81□□□□□ -1.32
VARS-221ENST00000463184 KRTAP5-7Q6L8G8 165 aa6.76□□□□□ -1.33
VARS-221ENST00000463184 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
VARS-221ENST00000463184 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
VARS-221ENST00000463184 KRTAP12-3P60328 96 aa6.71□□□□□ -1.34
VARS-221ENST00000463184 BRK1Q8WUW1 75 aa6.7□□□□□ -1.34
VARS-221ENST00000463184 KRTAP20-2Q3LI61 65 aa6.61□□□□□ -1.35
VARS-221ENST00000463184 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
VARS-221ENST00000463184 SPRR5A0A1B0GTR4 108 aa6.55□□□□□ -1.36
VARS-221ENST00000463184 KRTAP5-5Q701N2 237 aaPredicted RBP6.52□□□□□ -1.37
VARS-221ENST00000463184 KRTAP12-4P60329 112 aa6.47□□□□□ -1.37
VARS-221ENST00000463184 KRTAP19-4Q3LI73 84 aa6.41□□□□□ -1.38
VARS-221ENST00000463184 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
VARS-221ENST00000463184 SYNE1Q8NF91 8797 aaKnown RBP6.34□□□□□ -1.39
VARS-221ENST00000463184 PMAIP1Q13794 54 aa6.33□□□□□ -1.4
VARS-221ENST00000463184 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
VARS-221ENST00000463184 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
VARS-221ENST00000463184 PRO0628Q9UI54 55 aa6.2□□□□□ -1.42
VARS-221ENST00000463184 KRTAP4-11Q9BYQ6 195 aa6.14□□□□□ -1.43
VARS-221ENST00000463184 KRTAP5-2Q701N4 177 aa6.04□□□□□ -1.44
VARS-221ENST00000463184 PRAC1Q96KF2 57 aa5.98□□□□□ -1.45
VARS-221ENST00000463184 MT1AP04731 61 aa5.95□□□□□ -1.46
VARS-221ENST00000463184 KRTAP5-8O75690 187 aa5.94□□□□□ -1.46
VARS-221ENST00000463184 KRTAP6-1Q3LI64 71 aa5.93□□□□□ -1.46
VARS-221ENST00000463184 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
VARS-221ENST00000463184 KRTAP9-6A8MVA2 160 aa5.83□□□□□ -1.48
VARS-221ENST00000463184 KTN1-AS1Q86SY8 53 aa5.83□□□□□ -1.48
VARS-221ENST00000463184 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
VARS-221ENST00000463184 MUC5ACP98088 5654 aa5.8□□□□□ -1.48
VARS-221ENST00000463184 MUC5BQ9HC84 5762 aaPredicted RBP5.78□□□□□ -1.48
VARS-221ENST00000463184 AHNAKQ09666 5890 aaKnown RBP5.77□□□□□ -1.49
VARS-221ENST00000463184 KRTAP6-2Q3LI66 62 aa5.75□□□□□ -1.49
VARS-221ENST00000463184 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
VARS-221ENST00000463184 OBSCNQ5VST9 7968 aa5.69□□□□□ -1.5
VARS-221ENST00000463184 KRTAP5-1Q6L8H4 278 aa5.49□□□□□ -1.53
VARS-221ENST00000463184 MT3P25713 68 aa5.48□□□□□ -1.53
VARS-221ENST00000463184 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
VARS-221ENST00000463184 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
VARS-221ENST00000463184 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
VARS-221ENST00000463184 LCE1BQ5T7P3 118 aa4.84□□□□□ -1.63
VARS-221ENST00000463184 LCE1CQ5T751 118 aa4.77□□□□□ -1.65
VARS-221ENST00000463184 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
VARS-221ENST00000463184 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
VARS-221ENST00000463184 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
VARS-221ENST00000463184 LCE3EQ5T5B0 92 aa4.37□□□□□ -1.71
VARS-221ENST00000463184 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
VARS-221ENST00000463184 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
VARS-221ENST00000463184 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
VARS-221ENST00000463184 H3BS24 57 aa4.11□□□□□ -1.75
VARS-221ENST00000463184 PHGR1C9JFL3 82 aa4.08□□□□□ -1.76
VARS-221ENST00000463184 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
VARS-221ENST00000463184 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
VARS-221ENST00000463184 INE1O15225 51 aa3.63□□□□□ -1.83
VARS-221ENST00000463184 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
VARS-221ENST00000463184 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
VARS-221ENST00000463184 PRM1P04553 51 aa3.49□□□□□ -1.85
VARS-221ENST00000463184 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
VARS-221ENST00000463184 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 112.5 ms