RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 KRTAP19-5Q3LI72 72 aa4.43□□□□□ -1.7
HPS1-206ENST00000462743 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
HPS1-206ENST00000462743 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
HPS1-206ENST00000462743 LCE3AQ5TA76 89 aa4.39□□□□□ -1.71
HPS1-206ENST00000462743 LCE3BQ5TA77 95 aa4.39□□□□□ -1.71
HPS1-206ENST00000462743 K7ERS5 55 aa4.38□□□□□ -1.71
HPS1-206ENST00000462743 MT1GP13640 62 aa4.37□□□□□ -1.71
HPS1-206ENST00000462743 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
HPS1-206ENST00000462743 A6NED7 52 aa4.31□□□□□ -1.72
HPS1-206ENST00000462743 MT1LQ93083 61 aa4.31□□□□□ -1.72
HPS1-206ENST00000462743 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
HPS1-206ENST00000462743 MT1MQ8N339 61 aa4.26□□□□□ -1.73
HPS1-206ENST00000462743 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
HPS1-206ENST00000462743 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
HPS1-206ENST00000462743 CDC42SE1Q9NRR8 79 aa4.19□□□□□ -1.74
HPS1-206ENST00000462743 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
HPS1-206ENST00000462743 ROMO1P60602 79 aa4.12□□□□□ -1.75
HPS1-206ENST00000462743 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
HPS1-206ENST00000462743 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
HPS1-206ENST00000462743 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
HPS1-206ENST00000462743 KRTAP15-1Q3LI76 137 aa4.04□□□□□ -1.76
HPS1-206ENST00000462743 KRTAP5-4Q6L8H1 288 aa4.03□□□□□ -1.76
HPS1-206ENST00000462743 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
HPS1-206ENST00000462743 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
HPS1-206ENST00000462743 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
HPS1-206ENST00000462743 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
HPS1-206ENST00000462743 MT4P47944 62 aa3.91□□□□□ -1.78
HPS1-206ENST00000462743 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
HPS1-206ENST00000462743 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
HPS1-206ENST00000462743 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
HPS1-206ENST00000462743 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
HPS1-206ENST00000462743 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
HPS1-206ENST00000462743 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
HPS1-206ENST00000462743 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
HPS1-206ENST00000462743 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
HPS1-206ENST00000462743 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
HPS1-206ENST00000462743 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
HPS1-206ENST00000462743 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
HPS1-206ENST00000462743 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
HPS1-206ENST00000462743 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
HPS1-206ENST00000462743 MT1AP04731 61 aa3.69□□□□□ -1.82
HPS1-206ENST00000462743 PMAIP1Q13794 54 aa3.66□□□□□ -1.82
HPS1-206ENST00000462743 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
HPS1-206ENST00000462743 KRTAP5-10Q6L8G5 202 aa3.64□□□□□ -1.83
HPS1-206ENST00000462743 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
HPS1-206ENST00000462743 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
HPS1-206ENST00000462743 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
HPS1-206ENST00000462743 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
HPS1-206ENST00000462743 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
HPS1-206ENST00000462743 KRTAP5-7Q6L8G8 165 aa3.5□□□□□ -1.85
HPS1-206ENST00000462743 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
HPS1-206ENST00000462743 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
HPS1-206ENST00000462743 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.87
HPS1-206ENST00000462743 MT3P25713 68 aa3.38□□□□□ -1.87
HPS1-206ENST00000462743 KTN1-AS1Q86SY8 53 aa3.38□□□□□ -1.87
HPS1-206ENST00000462743 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
HPS1-206ENST00000462743 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
HPS1-206ENST00000462743 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
HPS1-206ENST00000462743 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
HPS1-206ENST00000462743 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
HPS1-206ENST00000462743 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
HPS1-206ENST00000462743 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
HPS1-206ENST00000462743 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
HPS1-206ENST00000462743 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
HPS1-206ENST00000462743 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
HPS1-206ENST00000462743 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
HPS1-206ENST00000462743 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
HPS1-206ENST00000462743 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
HPS1-206ENST00000462743 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
HPS1-206ENST00000462743 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
HPS1-206ENST00000462743 INE1O15225 51 aa2.54□□□□□ -2
HPS1-206ENST00000462743 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
HPS1-206ENST00000462743 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
HPS1-206ENST00000462743 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
HPS1-206ENST00000462743 PRM1P04553 51 aa2.08□□□□□ -2.08
HPS1-206ENST00000462743 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
HPS1-206ENST00000462743 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
HPS1-206ENST00000462743 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 66.5 ms