RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
CPNE1-221ENST00000462352 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
CPNE1-221ENST00000462352 TNP1P09430 55 aa4.52□□□□□ -1.69
CPNE1-221ENST00000462352 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
CPNE1-221ENST00000462352 SPRR2EP22531 72 aa4.43□□□□□ -1.7
CPNE1-221ENST00000462352 SPRR2BP35325 72 aa4.43□□□□□ -1.7
CPNE1-221ENST00000462352 SPRR2AP35326 72 aa4.43□□□□□ -1.7
CPNE1-221ENST00000462352 KRTAP19-7Q3SYF9 63 aa4.42□□□□□ -1.7
CPNE1-221ENST00000462352 KRTAP15-1Q3LI76 137 aa4.41□□□□□ -1.7
CPNE1-221ENST00000462352 LCE1AQ5T7P2 110 aa4.41□□□□□ -1.7
CPNE1-221ENST00000462352 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
CPNE1-221ENST00000462352 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
CPNE1-221ENST00000462352 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
CPNE1-221ENST00000462352 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
CPNE1-221ENST00000462352 MT1EP04732 61 aa4.36□□□□□ -1.71
CPNE1-221ENST00000462352 ROMO1P60602 79 aa4.36□□□□□ -1.71
CPNE1-221ENST00000462352 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
CPNE1-221ENST00000462352 SPRR2DP22532 72 aa4.28□□□□□ -1.72
CPNE1-221ENST00000462352 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
CPNE1-221ENST00000462352 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
CPNE1-221ENST00000462352 KRTAP2-3P0C7H8 128 aa4.22□□□□□ -1.73
CPNE1-221ENST00000462352 MT1LQ93083 61 aa4.22□□□□□ -1.73
CPNE1-221ENST00000462352 KRTAP2-4Q9BYR9 128 aa4.22□□□□□ -1.73
CPNE1-221ENST00000462352 MT1GP13640 62 aa4.19□□□□□ -1.74
CPNE1-221ENST00000462352 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
CPNE1-221ENST00000462352 SVIPQ8NHG7 77 aa4.16□□□□□ -1.74
CPNE1-221ENST00000462352 PP632Q6XCG6 107 aa4.15□□□□□ -1.75
CPNE1-221ENST00000462352 MT1MQ8N339 61 aa4.14□□□□□ -1.75
CPNE1-221ENST00000462352 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
CPNE1-221ENST00000462352 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
CPNE1-221ENST00000462352 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
CPNE1-221ENST00000462352 DSTQ03001 7570 aaKnown RBP4.05□□□□□ -1.76
CPNE1-221ENST00000462352 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
CPNE1-221ENST00000462352 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
CPNE1-221ENST00000462352 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
CPNE1-221ENST00000462352 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
CPNE1-221ENST00000462352 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
CPNE1-221ENST00000462352 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
CPNE1-221ENST00000462352 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
CPNE1-221ENST00000462352 MT4P47944 62 aa3.72□□□□□ -1.81
CPNE1-221ENST00000462352 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
CPNE1-221ENST00000462352 MT3P25713 68 aa3.71□□□□□ -1.82
CPNE1-221ENST00000462352 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
CPNE1-221ENST00000462352 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
CPNE1-221ENST00000462352 MT1AP04731 61 aa3.59□□□□□ -1.83
CPNE1-221ENST00000462352 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
CPNE1-221ENST00000462352 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
CPNE1-221ENST00000462352 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
CPNE1-221ENST00000462352 KRTAP20-2Q3LI61 65 aa3.55□□□□□ -1.84
CPNE1-221ENST00000462352 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
CPNE1-221ENST00000462352 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
CPNE1-221ENST00000462352 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
CPNE1-221ENST00000462352 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
CPNE1-221ENST00000462352 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
CPNE1-221ENST00000462352 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
CPNE1-221ENST00000462352 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
CPNE1-221ENST00000462352 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
CPNE1-221ENST00000462352 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
CPNE1-221ENST00000462352 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
CPNE1-221ENST00000462352 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
CPNE1-221ENST00000462352 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
CPNE1-221ENST00000462352 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
CPNE1-221ENST00000462352 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
CPNE1-221ENST00000462352 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
CPNE1-221ENST00000462352 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
CPNE1-221ENST00000462352 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.96
CPNE1-221ENST00000462352 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
CPNE1-221ENST00000462352 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
CPNE1-221ENST00000462352 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
CPNE1-221ENST00000462352 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
CPNE1-221ENST00000462352 INE1O15225 51 aa2.7□□□□□ -1.98
CPNE1-221ENST00000462352 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
CPNE1-221ENST00000462352 KRTAP21-2Q3LI59 83 aa2.34□□□□□ -2.03
CPNE1-221ENST00000462352 PRM1P04553 51 aa2.25□□□□□ -2.05
CPNE1-221ENST00000462352 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
CPNE1-221ENST00000462352 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.1
CPNE1-221ENST00000462352 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
CPNE1-221ENST00000462352 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms