RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 SPRR2EP22531 72 aa2.28□□□□□ -2.04
CLK1-207ENST00000461981 SPRR2BP35325 72 aa2.28□□□□□ -2.04
CLK1-207ENST00000461981 SPRR2AP35326 72 aa2.28□□□□□ -2.04
CLK1-207ENST00000461981 MACF1Q9UPN3 7388 aaKnown RBP2.27□□□□□ -2.05
CLK1-207ENST00000461981 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
CLK1-207ENST00000461981 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
CLK1-207ENST00000461981 KRTAP8-1Q8IUC2 63 aa2.24□□□□□ -2.05
CLK1-207ENST00000461981 SPRR2DP22532 72 aa2.23□□□□□ -2.05
CLK1-207ENST00000461981 KRTAP10-12P60413 245 aa2.22□□□□□ -2.05
CLK1-207ENST00000461981 MT1XP80297 61 aa2.22□□□□□ -2.05
CLK1-207ENST00000461981 SPRR2FQ96RM1 72 aa2.22□□□□□ -2.05
CLK1-207ENST00000461981 KRTAP4-8Q9BYQ9 185 aa2.21□□□□□ -2.06
CLK1-207ENST00000461981 FSIP2Q5CZC0 6907 aa2.21□□□□□ -2.06
CLK1-207ENST00000461981 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
CLK1-207ENST00000461981 LCE3BQ5TA77 95 aa2.19□□□□□ -2.06
CLK1-207ENST00000461981 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
CLK1-207ENST00000461981 LCE4AQ5TA78 99 aa2.16□□□□□ -2.06
CLK1-207ENST00000461981 SYNE2Q8WXH0 6885 aaKnown RBP2.14□□□□□ -2.07
CLK1-207ENST00000461981 KRTAP19-4Q3LI73 84 aa2.13□□□□□ -2.07
CLK1-207ENST00000461981 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
CLK1-207ENST00000461981 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
CLK1-207ENST00000461981 HMCN1Q96RW7 5635 aa2.1□□□□□ -2.07
CLK1-207ENST00000461981 LCE5AQ5TCM9 118 aa2.09□□□□□ -2.08
CLK1-207ENST00000461981 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
CLK1-207ENST00000461981 KMT2DO14686 5537 aa2.07□□□□□ -2.08
CLK1-207ENST00000461981 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
CLK1-207ENST00000461981 KRTAP4-12Q9BQ66 201 aa2.06□□□□□ -2.08
CLK1-207ENST00000461981 KRTAP4-8A0A0G2JLE6 195 aa2.06□□□□□ -2.08
CLK1-207ENST00000461981 KRTAP9-6A8MVA2 160 aa2.06□□□□□ -2.08
CLK1-207ENST00000461981 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
CLK1-207ENST00000461981 KRTAP19-3Q7Z4W3 81 aa2.05□□□□□ -2.08
CLK1-207ENST00000461981 KRTAP4-7Q9BYR0 210 aa2.05□□□□□ -2.08
CLK1-207ENST00000461981 MT1GP13640 62 aa2.04□□□□□ -2.08
CLK1-207ENST00000461981 LCE3CQ5T5A8 94 aa2.04□□□□□ -2.08
CLK1-207ENST00000461981 KRTAP9-9Q9BYP9 154 aa2.02□□□□□ -2.09
CLK1-207ENST00000461981 KRTAP9-4Q9BYQ2 154 aa2.02□□□□□ -2.09
CLK1-207ENST00000461981 MT1EP04732 61 aa2.02□□□□□ -2.09
CLK1-207ENST00000461981 KRTAP10-7P60409 375 aaPredicted RBP2.02□□□□□ -2.09
CLK1-207ENST00000461981 KRTAP12-4P60329 112 aa2□□□□□ -2.09
CLK1-207ENST00000461981 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
CLK1-207ENST00000461981 KRTAP19-7Q3SYF9 63 aa1.99□□□□□ -2.09
CLK1-207ENST00000461981 LCE1DQ5T752 114 aa1.97□□□□□ -2.09
CLK1-207ENST00000461981 KRTAP19-5Q3LI72 72 aa1.96□□□□□ -2.1
CLK1-207ENST00000461981 KRTAP4-9Q9BYQ8 210 aa1.94□□□□□ -2.1
CLK1-207ENST00000461981 MT1MQ8N339 61 aa1.92□□□□□ -2.1
CLK1-207ENST00000461981 LCE1EQ5T753 118 aa1.9□□□□□ -2.1
CLK1-207ENST00000461981 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.11
CLK1-207ENST00000461981 MT1LQ93083 61 aa1.9□□□□□ -2.11
CLK1-207ENST00000461981 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
CLK1-207ENST00000461981 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
CLK1-207ENST00000461981 PRM1P04553 51 aa1.84□□□□□ -2.12
CLK1-207ENST00000461981 KRTAP4-11Q9BYQ6 195 aa1.82□□□□□ -2.12
CLK1-207ENST00000461981 MT4P47944 62 aa1.8□□□□□ -2.12
CLK1-207ENST00000461981 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
CLK1-207ENST00000461981 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
CLK1-207ENST00000461981 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
CLK1-207ENST00000461981 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
CLK1-207ENST00000461981 LCE1FQ5T754 118 aa1.7□□□□□ -2.14
CLK1-207ENST00000461981 KRTAP4-3Q9BYR4 195 aa1.7□□□□□ -2.14
CLK1-207ENST00000461981 MT1AP04731 61 aa1.69□□□□□ -2.14
CLK1-207ENST00000461981 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
CLK1-207ENST00000461981 LCE3EQ5T5B0 92 aa1.67□□□□□ -2.14
CLK1-207ENST00000461981 DSTQ03001 7570 aaKnown RBP1.67□□□□□ -2.14
CLK1-207ENST00000461981 LCE3DQ9BYE3 92 aa1.66□□□□□ -2.14
CLK1-207ENST00000461981 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
CLK1-207ENST00000461981 KRTAP6-2Q3LI66 62 aa1.63□□□□□ -2.15
CLK1-207ENST00000461981 MT3P25713 68 aa1.61□□□□□ -2.15
CLK1-207ENST00000461981 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
CLK1-207ENST00000461981 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.17
CLK1-207ENST00000461981 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
CLK1-207ENST00000461981 LCE1CQ5T751 118 aa1.4□□□□□ -2.19
CLK1-207ENST00000461981 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
CLK1-207ENST00000461981 KRTAP5-11Q6L8G4 156 aa1.33□□□□□ -2.2
CLK1-207ENST00000461981 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
CLK1-207ENST00000461981 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
CLK1-207ENST00000461981 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
CLK1-207ENST00000461981 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
CLK1-207ENST00000461981 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 70.9 ms