RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 Q1T7F1 81 aa2.66□□□□□ -1.98
THUMPD3-207ENST00000461636 MIR22HGQ0VDD5 57 aa2.64□□□□□ -1.99
THUMPD3-207ENST00000461636 A0A1B0GU69 56 aa2.63□□□□□ -1.99
THUMPD3-207ENST00000461636 P0C880 135 aa2.63□□□□□ -1.99
THUMPD3-207ENST00000461636 LINC01558Q9Y6Z2 57 aa2.63□□□□□ -1.99
THUMPD3-207ENST00000461636 M0QZ58 72 aa2.62□□□□□ -1.99
THUMPD3-207ENST00000461636 USH2AO75445 5202 aa2.59□□□□□ -1.99
THUMPD3-207ENST00000461636 UQCR11O14957 56 aa2.59□□□□□ -1.99
THUMPD3-207ENST00000461636 MT2AP02795 61 aa2.58□□□□□ -2
THUMPD3-207ENST00000461636 Q5VV11 94 aa2.58□□□□□ -2
THUMPD3-207ENST00000461636 MT1FP04733 61 aa2.56□□□□□ -2
THUMPD3-207ENST00000461636 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
THUMPD3-207ENST00000461636 SSPOA2VEC9 5147 aa2.55□□□□□ -2
THUMPD3-207ENST00000461636 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
THUMPD3-207ENST00000461636 KRTAP10-10P60014 251 aa2.53□□□□□ -2
THUMPD3-207ENST00000461636 FSIP2Q5CZC0 6907 aa2.52□□□□□ -2.01
THUMPD3-207ENST00000461636 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
THUMPD3-207ENST00000461636 CDC42SE1Q9NRR8 79 aa2.5□□□□□ -2.01
THUMPD3-207ENST00000461636 SPATA8Q6RVD6 105 aa2.49□□□□□ -2.01
THUMPD3-207ENST00000461636 CRCT1Q9UGL9 99 aa2.48□□□□□ -2.01
THUMPD3-207ENST00000461636 FCGBPQ9Y6R7 5405 aaPredicted RBP2.48□□□□□ -2.01
THUMPD3-207ENST00000461636 PLAC4Q8WY50 150 aa2.46□□□□□ -2.02
THUMPD3-207ENST00000461636 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
THUMPD3-207ENST00000461636 KRTAP19-8Q3LI54 63 aa2.42□□□□□ -2.02
THUMPD3-207ENST00000461636 INE1O15225 51 aa2.41□□□□□ -2.02
THUMPD3-207ENST00000461636 MT1BP07438 61 aa2.4□□□□□ -2.03
THUMPD3-207ENST00000461636 KRTAP19-6Q3LI70 58 aa2.4□□□□□ -2.03
THUMPD3-207ENST00000461636 A0A0D9SG42 100 aa2.36□□□□□ -2.03
THUMPD3-207ENST00000461636 KRTAP12-1P59990 96 aa2.35□□□□□ -2.03
THUMPD3-207ENST00000461636 KRTAP13-4Q3LI77 160 aa2.35□□□□□ -2.03
THUMPD3-207ENST00000461636 MACF1Q9UPN3 7388 aaKnown RBP2.32□□□□□ -2.04
THUMPD3-207ENST00000461636 TNP1P09430 55 aa2.3□□□□□ -2.04
THUMPD3-207ENST00000461636 KMT2DO14686 5537 aa2.27□□□□□ -2.05
THUMPD3-207ENST00000461636 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
THUMPD3-207ENST00000461636 MT1XP80297 61 aa2.26□□□□□ -2.05
THUMPD3-207ENST00000461636 SYNE2Q8WXH0 6885 aaKnown RBP2.26□□□□□ -2.05
THUMPD3-207ENST00000461636 MUC12Q9UKN1 5478 aa2.25□□□□□ -2.05
THUMPD3-207ENST00000461636 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
THUMPD3-207ENST00000461636 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
THUMPD3-207ENST00000461636 MDN1Q9NU22 5596 aa2.22□□□□□ -2.05
THUMPD3-207ENST00000461636 KRTAP6-3Q3LI67 103 aa2.2□□□□□ -2.06
THUMPD3-207ENST00000461636 NEBP20929 6669 aa2.15□□□□□ -2.06
THUMPD3-207ENST00000461636 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
THUMPD3-207ENST00000461636 SPRR2FQ96RM1 72 aa2.06□□□□□ -2.08
THUMPD3-207ENST00000461636 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
THUMPD3-207ENST00000461636 KRTAP19-7Q3SYF9 63 aa2.04□□□□□ -2.08
THUMPD3-207ENST00000461636 MT1EP04732 61 aa2□□□□□ -2.09
THUMPD3-207ENST00000461636 MT1GP13640 62 aa2□□□□□ -2.09
THUMPD3-207ENST00000461636 SPRR2EP22531 72 aa2□□□□□ -2.09
THUMPD3-207ENST00000461636 SPRR2BP35325 72 aa2□□□□□ -2.09
THUMPD3-207ENST00000461636 SPRR2AP35326 72 aa2□□□□□ -2.09
THUMPD3-207ENST00000461636 KRTAP19-5Q3LI72 72 aa1.98□□□□□ -2.09
THUMPD3-207ENST00000461636 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
THUMPD3-207ENST00000461636 KRTAP20-1Q3LI63 56 aa1.96□□□□□ -2.1
THUMPD3-207ENST00000461636 KRTAP2-3P0C7H8 128 aa1.95□□□□□ -2.1
THUMPD3-207ENST00000461636 KRTAP19-3Q7Z4W3 81 aa1.95□□□□□ -2.1
THUMPD3-207ENST00000461636 KRTAP2-4Q9BYR9 128 aa1.95□□□□□ -2.1
THUMPD3-207ENST00000461636 SPRR2DP22532 72 aa1.93□□□□□ -2.1
THUMPD3-207ENST00000461636 MT1LQ93083 61 aa1.92□□□□□ -2.1
THUMPD3-207ENST00000461636 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.11
THUMPD3-207ENST00000461636 KRTAP2-1Q9BYU5 128 aa1.89□□□□□ -2.11
THUMPD3-207ENST00000461636 MT1MQ8N339 61 aa1.88□□□□□ -2.11
THUMPD3-207ENST00000461636 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
THUMPD3-207ENST00000461636 SYNE1Q8NF91 8797 aaKnown RBP1.69□□□□□ -2.14
THUMPD3-207ENST00000461636 MT1AP04731 61 aa1.67□□□□□ -2.14
THUMPD3-207ENST00000461636 MT4P47944 62 aa1.67□□□□□ -2.14
THUMPD3-207ENST00000461636 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
THUMPD3-207ENST00000461636 KRTAP20-2Q3LI61 65 aa1.64□□□□□ -2.15
THUMPD3-207ENST00000461636 KRTAP6-1Q3LI64 71 aa1.62□□□□□ -2.15
THUMPD3-207ENST00000461636 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
THUMPD3-207ENST00000461636 KRTAP6-2Q3LI66 62 aa1.51□□□□□ -2.17
THUMPD3-207ENST00000461636 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
THUMPD3-207ENST00000461636 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
THUMPD3-207ENST00000461636 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
THUMPD3-207ENST00000461636 PRM1P04553 51 aa1.11□□□□□ -2.23
THUMPD3-207ENST00000461636 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
THUMPD3-207ENST00000461636 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
THUMPD3-207ENST00000461636 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 67.7 ms