RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 KRTAP9-2Q9BYQ4 174 aa6.91□□□□□ -1.3
CCM2-203ENST00000461377 KRTAP19-3Q7Z4W3 81 aa6.84□□□□□ -1.32
CCM2-203ENST00000461377 MT1GP13640 62 aa6.79□□□□□ -1.32
CCM2-203ENST00000461377 MT1MQ8N339 61 aa6.77□□□□□ -1.33
CCM2-203ENST00000461377 SPRR2FQ96RM1 72 aa6.75□□□□□ -1.33
CCM2-203ENST00000461377 MUC12Q9UKN1 5478 aa6.74□□□□□ -1.33
CCM2-203ENST00000461377 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
CCM2-203ENST00000461377 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.34
CCM2-203ENST00000461377 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
CCM2-203ENST00000461377 MACF1Q9UPN3 7388 aaKnown RBP6.64□□□□□ -1.35
CCM2-203ENST00000461377 KRTAP2-3P0C7H8 128 aa6.6□□□□□ -1.35
CCM2-203ENST00000461377 KRTAP2-4Q9BYR9 128 aa6.6□□□□□ -1.35
CCM2-203ENST00000461377 KRTAP2-1Q9BYU5 128 aa6.6□□□□□ -1.35
CCM2-203ENST00000461377 LOC100996750A0A140TA64 210 aa6.57□□□□□ -1.36
CCM2-203ENST00000461377 KRTAP5-9P26371 169 aa6.53□□□□□ -1.36
CCM2-203ENST00000461377 LCE1AQ5T7P2 110 aa6.41□□□□□ -1.38
CCM2-203ENST00000461377 SYNE2Q8WXH0 6885 aaKnown RBP6.4□□□□□ -1.38
CCM2-203ENST00000461377 MDN1Q9NU22 5596 aa6.32□□□□□ -1.4
CCM2-203ENST00000461377 SPRR2EP22531 72 aa6.29□□□□□ -1.4
CCM2-203ENST00000461377 SPRR2BP35325 72 aa6.29□□□□□ -1.4
CCM2-203ENST00000461377 SPRR2AP35326 72 aa6.29□□□□□ -1.4
CCM2-203ENST00000461377 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.22□□□□□ -1.41
CCM2-203ENST00000461377 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
CCM2-203ENST00000461377 DSTQ03001 7570 aaKnown RBP6.2□□□□□ -1.42
CCM2-203ENST00000461377 KRTAP9-6A0A140TA67 174 aa6.17□□□□□ -1.42
CCM2-203ENST00000461377 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
CCM2-203ENST00000461377 MT1AP04731 61 aa6.04□□□□□ -1.44
CCM2-203ENST00000461377 SPRR2DP22532 72 aa6.04□□□□□ -1.44
CCM2-203ENST00000461377 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
CCM2-203ENST00000461377 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
CCM2-203ENST00000461377 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
CCM2-203ENST00000461377 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
CCM2-203ENST00000461377 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.49
CCM2-203ENST00000461377 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
CCM2-203ENST00000461377 NEBP20929 6669 aa5.68□□□□□ -1.5
CCM2-203ENST00000461377 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
CCM2-203ENST00000461377 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
CCM2-203ENST00000461377 LCE3DQ9BYE3 92 aa5.53□□□□□ -1.52
CCM2-203ENST00000461377 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
CCM2-203ENST00000461377 MT3P25713 68 aa5.44□□□□□ -1.54
CCM2-203ENST00000461377 LCE3EQ5T5B0 92 aa5.43□□□□□ -1.54
CCM2-203ENST00000461377 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
CCM2-203ENST00000461377 KRTAP4-6Q9BYQ5 205 aa5.29□□□□□ -1.56
CCM2-203ENST00000461377 MT4P47944 62 aa5.25□□□□□ -1.57
CCM2-203ENST00000461377 KRTAP2-2Q9BYT5 123 aa5.24□□□□□ -1.57
CCM2-203ENST00000461377 KRTAP20-2Q3LI61 65 aa5.2□□□□□ -1.58
CCM2-203ENST00000461377 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
CCM2-203ENST00000461377 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
CCM2-203ENST00000461377 LCE1DQ5T752 114 aa5.09□□□□□ -1.6
CCM2-203ENST00000461377 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
CCM2-203ENST00000461377 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
CCM2-203ENST00000461377 PRM1P04553 51 aa4.96□□□□□ -1.62
CCM2-203ENST00000461377 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
CCM2-203ENST00000461377 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
CCM2-203ENST00000461377 MUC5ACP98088 5654 aa4.46□□□□□ -1.7
CCM2-203ENST00000461377 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
CCM2-203ENST00000461377 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
CCM2-203ENST00000461377 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
CCM2-203ENST00000461377 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
CCM2-203ENST00000461377 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
CCM2-203ENST00000461377 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
CCM2-203ENST00000461377 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
CCM2-203ENST00000461377 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
CCM2-203ENST00000461377 KRTAP5-7Q6L8G8 165 aa4.16□□□□□ -1.74
CCM2-203ENST00000461377 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
CCM2-203ENST00000461377 KRTAP21-2Q3LI59 83 aa3.93□□□□□ -1.78
CCM2-203ENST00000461377 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
CCM2-203ENST00000461377 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
CCM2-203ENST00000461377 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
CCM2-203ENST00000461377 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
CCM2-203ENST00000461377 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
CCM2-203ENST00000461377 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
CCM2-203ENST00000461377 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
CCM2-203ENST00000461377 PHGR1C9JFL3 82 aa3.23□□□□□ -1.89
CCM2-203ENST00000461377 KRTAP21-1Q3LI58 79 aa3.11□□□□□ -1.91
CCM2-203ENST00000461377 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
CCM2-203ENST00000461377 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
CCM2-203ENST00000461377 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 91.5 ms