RNA–Protein interactions for RNA: ENST00000460797.5

ITGB5-202, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 2,228 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-202ENST00000460797 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
ITGB5-202ENST00000460797 MT1LQ93083 61 aa4.13□□□□□ -1.75
ITGB5-202ENST00000460797 MT1EP04732 61 aa4.08□□□□□ -1.76
ITGB5-202ENST00000460797 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
ITGB5-202ENST00000460797 KRTAP9-6A0A140TA67 174 aa3.99□□□□□ -1.77
ITGB5-202ENST00000460797 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
ITGB5-202ENST00000460797 KRTAP12-4P60329 112 aa3.91□□□□□ -1.78
ITGB5-202ENST00000460797 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
ITGB5-202ENST00000460797 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
ITGB5-202ENST00000460797 MT1GP13640 62 aa3.83□□□□□ -1.8
ITGB5-202ENST00000460797 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
ITGB5-202ENST00000460797 MT1MQ8N339 61 aa3.79□□□□□ -1.8
ITGB5-202ENST00000460797 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
ITGB5-202ENST00000460797 KRTAP19-3Q7Z4W3 81 aa3.74□□□□□ -1.81
ITGB5-202ENST00000460797 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
ITGB5-202ENST00000460797 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
ITGB5-202ENST00000460797 MT1AP04731 61 aa3.67□□□□□ -1.82
ITGB5-202ENST00000460797 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
ITGB5-202ENST00000460797 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.64□□□□□ -1.83
ITGB5-202ENST00000460797 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
ITGB5-202ENST00000460797 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
ITGB5-202ENST00000460797 KRTAP9-7A8MTY7 169 aa3.59□□□□□ -1.84
ITGB5-202ENST00000460797 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
ITGB5-202ENST00000460797 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
ITGB5-202ENST00000460797 KRTAP4-6Q9BYQ5 205 aa3.57□□□□□ -1.84
ITGB5-202ENST00000460797 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
ITGB5-202ENST00000460797 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
ITGB5-202ENST00000460797 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
ITGB5-202ENST00000460797 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
ITGB5-202ENST00000460797 KRTAP5-5Q701N2 237 aaPredicted RBP3.53□□□□□ -1.84
ITGB5-202ENST00000460797 SPRR2EP22531 72 aa3.52□□□□□ -1.85
ITGB5-202ENST00000460797 SPRR2BP35325 72 aa3.52□□□□□ -1.85
ITGB5-202ENST00000460797 SPRR2AP35326 72 aa3.52□□□□□ -1.85
ITGB5-202ENST00000460797 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
ITGB5-202ENST00000460797 PRM1P04553 51 aa3.5□□□□□ -1.85
ITGB5-202ENST00000460797 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
ITGB5-202ENST00000460797 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
ITGB5-202ENST00000460797 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
ITGB5-202ENST00000460797 SPRR2DP22532 72 aa3.39□□□□□ -1.87
ITGB5-202ENST00000460797 NEBP20929 6669 aa3.36□□□□□ -1.87
ITGB5-202ENST00000460797 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
ITGB5-202ENST00000460797 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
ITGB5-202ENST00000460797 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
ITGB5-202ENST00000460797 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
ITGB5-202ENST00000460797 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
ITGB5-202ENST00000460797 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
ITGB5-202ENST00000460797 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
ITGB5-202ENST00000460797 MT3P25713 68 aa3.11□□□□□ -1.91
ITGB5-202ENST00000460797 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
ITGB5-202ENST00000460797 LCE1DQ5T752 114 aa2.96□□□□□ -1.94
ITGB5-202ENST00000460797 MT4P47944 62 aa2.95□□□□□ -1.94
ITGB5-202ENST00000460797 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
ITGB5-202ENST00000460797 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
ITGB5-202ENST00000460797 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
ITGB5-202ENST00000460797 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
ITGB5-202ENST00000460797 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
ITGB5-202ENST00000460797 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
ITGB5-202ENST00000460797 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
ITGB5-202ENST00000460797 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
ITGB5-202ENST00000460797 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
ITGB5-202ENST00000460797 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
ITGB5-202ENST00000460797 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
ITGB5-202ENST00000460797 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
ITGB5-202ENST00000460797 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
ITGB5-202ENST00000460797 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
ITGB5-202ENST00000460797 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
ITGB5-202ENST00000460797 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
ITGB5-202ENST00000460797 LCE1CQ5T751 118 aa2.34□□□□□ -2.04
ITGB5-202ENST00000460797 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
ITGB5-202ENST00000460797 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
ITGB5-202ENST00000460797 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
ITGB5-202ENST00000460797 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
ITGB5-202ENST00000460797 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
ITGB5-202ENST00000460797 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
ITGB5-202ENST00000460797 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
ITGB5-202ENST00000460797 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
ITGB5-202ENST00000460797 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
ITGB5-202ENST00000460797 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms