RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 TNP1P09430 55 aa4.94□□□□□ -1.62
SHISA5-211ENST00000460758 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
SHISA5-211ENST00000460758 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
SHISA5-211ENST00000460758 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
SHISA5-211ENST00000460758 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
SHISA5-211ENST00000460758 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
SHISA5-211ENST00000460758 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
SHISA5-211ENST00000460758 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
SHISA5-211ENST00000460758 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
SHISA5-211ENST00000460758 MT1EP04732 61 aa4.77□□□□□ -1.65
SHISA5-211ENST00000460758 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
SHISA5-211ENST00000460758 KRTAP19-3Q7Z4W3 81 aa4.72□□□□□ -1.65
SHISA5-211ENST00000460758 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
SHISA5-211ENST00000460758 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
SHISA5-211ENST00000460758 MT1GP13640 62 aa4.62□□□□□ -1.67
SHISA5-211ENST00000460758 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
SHISA5-211ENST00000460758 MT1LQ93083 61 aa4.56□□□□□ -1.68
SHISA5-211ENST00000460758 MT1MQ8N339 61 aa4.55□□□□□ -1.68
SHISA5-211ENST00000460758 H3BS24 57 aa4.54□□□□□ -1.68
SHISA5-211ENST00000460758 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
SHISA5-211ENST00000460758 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
SHISA5-211ENST00000460758 GPR98Q8WXG9 6306 aa4.45□□□□□ -1.7
SHISA5-211ENST00000460758 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
SHISA5-211ENST00000460758 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
SHISA5-211ENST00000460758 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
SHISA5-211ENST00000460758 KRTAP19-4Q3LI73 84 aa4.4□□□□□ -1.71
SHISA5-211ENST00000460758 MT4P47944 62 aa4.37□□□□□ -1.71
SHISA5-211ENST00000460758 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
SHISA5-211ENST00000460758 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
SHISA5-211ENST00000460758 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.72
SHISA5-211ENST00000460758 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
SHISA5-211ENST00000460758 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
SHISA5-211ENST00000460758 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
SHISA5-211ENST00000460758 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
SHISA5-211ENST00000460758 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
SHISA5-211ENST00000460758 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
SHISA5-211ENST00000460758 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
SHISA5-211ENST00000460758 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
SHISA5-211ENST00000460758 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
SHISA5-211ENST00000460758 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
SHISA5-211ENST00000460758 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
SHISA5-211ENST00000460758 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
SHISA5-211ENST00000460758 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
SHISA5-211ENST00000460758 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
SHISA5-211ENST00000460758 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
SHISA5-211ENST00000460758 MT1AP04731 61 aa3.88□□□□□ -1.79
SHISA5-211ENST00000460758 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
SHISA5-211ENST00000460758 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
SHISA5-211ENST00000460758 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
SHISA5-211ENST00000460758 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
SHISA5-211ENST00000460758 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
SHISA5-211ENST00000460758 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
SHISA5-211ENST00000460758 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
SHISA5-211ENST00000460758 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
SHISA5-211ENST00000460758 MT3P25713 68 aa3.55□□□□□ -1.84
SHISA5-211ENST00000460758 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
SHISA5-211ENST00000460758 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
SHISA5-211ENST00000460758 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
SHISA5-211ENST00000460758 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
SHISA5-211ENST00000460758 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
SHISA5-211ENST00000460758 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
SHISA5-211ENST00000460758 INE1O15225 51 aa3.33□□□□□ -1.88
SHISA5-211ENST00000460758 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
SHISA5-211ENST00000460758 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
SHISA5-211ENST00000460758 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
SHISA5-211ENST00000460758 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
SHISA5-211ENST00000460758 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
SHISA5-211ENST00000460758 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
SHISA5-211ENST00000460758 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
SHISA5-211ENST00000460758 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
SHISA5-211ENST00000460758 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
SHISA5-211ENST00000460758 PRM1P04553 51 aa2.64□□□□□ -1.99
SHISA5-211ENST00000460758 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
SHISA5-211ENST00000460758 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
SHISA5-211ENST00000460758 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
SHISA5-211ENST00000460758 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SHISA5-211ENST00000460758 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
SHISA5-211ENST00000460758 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 96.6 ms