RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
CCDC12-204ENST00000460035 SPRR2DP22532 72 aa3.99□□□□□ -1.77
CCDC12-204ENST00000460035 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
CCDC12-204ENST00000460035 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
CCDC12-204ENST00000460035 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
CCDC12-204ENST00000460035 ROMO1P60602 79 aa3.95□□□□□ -1.78
CCDC12-204ENST00000460035 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
CCDC12-204ENST00000460035 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
CCDC12-204ENST00000460035 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
CCDC12-204ENST00000460035 KRTAP12-3P60328 96 aa3.9□□□□□ -1.79
CCDC12-204ENST00000460035 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
CCDC12-204ENST00000460035 MT1GP13640 62 aa3.88□□□□□ -1.79
CCDC12-204ENST00000460035 MT1LQ93083 61 aa3.88□□□□□ -1.79
CCDC12-204ENST00000460035 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
CCDC12-204ENST00000460035 PP632Q6XCG6 107 aa3.85□□□□□ -1.79
CCDC12-204ENST00000460035 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
CCDC12-204ENST00000460035 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
CCDC12-204ENST00000460035 MT1MQ8N339 61 aa3.81□□□□□ -1.8
CCDC12-204ENST00000460035 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
CCDC12-204ENST00000460035 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
CCDC12-204ENST00000460035 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
CCDC12-204ENST00000460035 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
CCDC12-204ENST00000460035 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.81
CCDC12-204ENST00000460035 PMAIP1Q13794 54 aa3.68□□□□□ -1.82
CCDC12-204ENST00000460035 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
CCDC12-204ENST00000460035 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
CCDC12-204ENST00000460035 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
CCDC12-204ENST00000460035 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
CCDC12-204ENST00000460035 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
CCDC12-204ENST00000460035 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
CCDC12-204ENST00000460035 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
CCDC12-204ENST00000460035 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
CCDC12-204ENST00000460035 MT4P47944 62 aa3.48□□□□□ -1.85
CCDC12-204ENST00000460035 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
CCDC12-204ENST00000460035 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
CCDC12-204ENST00000460035 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
CCDC12-204ENST00000460035 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
CCDC12-204ENST00000460035 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
CCDC12-204ENST00000460035 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
CCDC12-204ENST00000460035 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
CCDC12-204ENST00000460035 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.88
CCDC12-204ENST00000460035 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
CCDC12-204ENST00000460035 MT1AP04731 61 aa3.31□□□□□ -1.88
CCDC12-204ENST00000460035 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
CCDC12-204ENST00000460035 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
CCDC12-204ENST00000460035 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
CCDC12-204ENST00000460035 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
CCDC12-204ENST00000460035 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
CCDC12-204ENST00000460035 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
CCDC12-204ENST00000460035 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
CCDC12-204ENST00000460035 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
CCDC12-204ENST00000460035 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.91
CCDC12-204ENST00000460035 MT3P25713 68 aa3.02□□□□□ -1.93
CCDC12-204ENST00000460035 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
CCDC12-204ENST00000460035 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
CCDC12-204ENST00000460035 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
CCDC12-204ENST00000460035 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
CCDC12-204ENST00000460035 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
CCDC12-204ENST00000460035 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
CCDC12-204ENST00000460035 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
CCDC12-204ENST00000460035 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
CCDC12-204ENST00000460035 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
CCDC12-204ENST00000460035 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
CCDC12-204ENST00000460035 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
CCDC12-204ENST00000460035 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
CCDC12-204ENST00000460035 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
CCDC12-204ENST00000460035 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
CCDC12-204ENST00000460035 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
CCDC12-204ENST00000460035 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
CCDC12-204ENST00000460035 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
CCDC12-204ENST00000460035 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
CCDC12-204ENST00000460035 INE1O15225 51 aa2.08□□□□□ -2.08
CCDC12-204ENST00000460035 PRM1P04553 51 aa2.04□□□□□ -2.08
CCDC12-204ENST00000460035 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
CCDC12-204ENST00000460035 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
CCDC12-204ENST00000460035 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
CCDC12-204ENST00000460035 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
CCDC12-204ENST00000460035 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 73 ms