RNA–Protein interactions for RNA: ENST00000459908.5

ATP11A-208, Transcript of ATPase phospholipid transporting 11A, humanhuman

TSL 2

Gene ATP11A, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11A-208ENST00000459908 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
ATP11A-208ENST00000459908 USH2AO75445 5202 aa3.74□□□□□ -1.81
ATP11A-208ENST00000459908 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
ATP11A-208ENST00000459908 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
ATP11A-208ENST00000459908 MT1EP04732 61 aa3.68□□□□□ -1.82
ATP11A-208ENST00000459908 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
ATP11A-208ENST00000459908 MT1LQ93083 61 aa3.62□□□□□ -1.83
ATP11A-208ENST00000459908 LCE3BQ5TA77 95 aa3.62□□□□□ -1.83
ATP11A-208ENST00000459908 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
ATP11A-208ENST00000459908 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
ATP11A-208ENST00000459908 MT1MQ8N339 61 aa3.54□□□□□ -1.84
ATP11A-208ENST00000459908 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
ATP11A-208ENST00000459908 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
ATP11A-208ENST00000459908 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
ATP11A-208ENST00000459908 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
ATP11A-208ENST00000459908 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
ATP11A-208ENST00000459908 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
ATP11A-208ENST00000459908 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
ATP11A-208ENST00000459908 MT4P47944 62 aa3.46□□□□□ -1.86
ATP11A-208ENST00000459908 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
ATP11A-208ENST00000459908 INE1O15225 51 aa3.46□□□□□ -1.86
ATP11A-208ENST00000459908 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
ATP11A-208ENST00000459908 KRTAP2-1Q9BYU5 128 aa3.42□□□□□ -1.86
ATP11A-208ENST00000459908 KMT2DO14686 5537 aa3.42□□□□□ -1.86
ATP11A-208ENST00000459908 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
ATP11A-208ENST00000459908 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
ATP11A-208ENST00000459908 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
ATP11A-208ENST00000459908 NEBP20929 6669 aa3.32□□□□□ -1.88
ATP11A-208ENST00000459908 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
ATP11A-208ENST00000459908 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
ATP11A-208ENST00000459908 KRTAP4-9Q9BYQ8 210 aa3.24□□□□□ -1.89
ATP11A-208ENST00000459908 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
ATP11A-208ENST00000459908 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
ATP11A-208ENST00000459908 MT3P25713 68 aa3.21□□□□□ -1.9
ATP11A-208ENST00000459908 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
ATP11A-208ENST00000459908 MT1AP04731 61 aa3.19□□□□□ -1.9
ATP11A-208ENST00000459908 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
ATP11A-208ENST00000459908 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
ATP11A-208ENST00000459908 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
ATP11A-208ENST00000459908 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.92
ATP11A-208ENST00000459908 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
ATP11A-208ENST00000459908 LCE1DQ5T752 114 aa3□□□□□ -1.93
ATP11A-208ENST00000459908 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
ATP11A-208ENST00000459908 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
ATP11A-208ENST00000459908 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
ATP11A-208ENST00000459908 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
ATP11A-208ENST00000459908 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.94
ATP11A-208ENST00000459908 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
ATP11A-208ENST00000459908 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
ATP11A-208ENST00000459908 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
ATP11A-208ENST00000459908 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
ATP11A-208ENST00000459908 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
ATP11A-208ENST00000459908 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -1.99
ATP11A-208ENST00000459908 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
ATP11A-208ENST00000459908 PRM1P04553 51 aa2.54□□□□□ -2
ATP11A-208ENST00000459908 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
ATP11A-208ENST00000459908 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
ATP11A-208ENST00000459908 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
ATP11A-208ENST00000459908 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
ATP11A-208ENST00000459908 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
ATP11A-208ENST00000459908 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
ATP11A-208ENST00000459908 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
ATP11A-208ENST00000459908 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
ATP11A-208ENST00000459908 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
ATP11A-208ENST00000459908 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
ATP11A-208ENST00000459908 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
ATP11A-208ENST00000459908 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
ATP11A-208ENST00000459908 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
ATP11A-208ENST00000459908 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
ATP11A-208ENST00000459908 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
ATP11A-208ENST00000459908 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
ATP11A-208ENST00000459908 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
ATP11A-208ENST00000459908 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
ATP11A-208ENST00000459908 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
ATP11A-208ENST00000459908 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
ATP11A-208ENST00000459908 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
ATP11A-208ENST00000459908 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
ATP11A-208ENST00000459908 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 101.8 ms