RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 MT4P47944 62 aa5.57□□□□□ -1.52
LMNA-209ENST00000459904 CAMK2N1Q7Z7J9 78 aa5.57□□□□□ -1.52
LMNA-209ENST00000459904 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
LMNA-209ENST00000459904 HMCN1Q96RW7 5635 aa5.5□□□□□ -1.53
LMNA-209ENST00000459904 K7ERS5 55 aa5.48□□□□□ -1.53
LMNA-209ENST00000459904 AHNAK2Q8IVF2 5795 aa5.47□□□□□ -1.53
LMNA-209ENST00000459904 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
LMNA-209ENST00000459904 C10orf95Q9H7T3 257 aa5.45□□□□□ -1.54
LMNA-209ENST00000459904 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
LMNA-209ENST00000459904 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
LMNA-209ENST00000459904 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
LMNA-209ENST00000459904 MT1GP13640 62 aa5.42□□□□□ -1.54
LMNA-209ENST00000459904 MT1MQ8N339 61 aa5.4□□□□□ -1.54
LMNA-209ENST00000459904 KRTAP4-6Q9BYQ5 205 aa5.38□□□□□ -1.55
LMNA-209ENST00000459904 KRTAP5-10Q6L8G5 202 aa5.37□□□□□ -1.55
LMNA-209ENST00000459904 MT1LQ93083 61 aa5.34□□□□□ -1.55
LMNA-209ENST00000459904 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
LMNA-209ENST00000459904 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
LMNA-209ENST00000459904 TNP1P09430 55 aa5.28□□□□□ -1.56
LMNA-209ENST00000459904 ROMO1P60602 79 aa5.26□□□□□ -1.57
LMNA-209ENST00000459904 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.58
LMNA-209ENST00000459904 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
LMNA-209ENST00000459904 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
LMNA-209ENST00000459904 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
LMNA-209ENST00000459904 PRO0628Q9UI54 55 aa5.18□□□□□ -1.58
LMNA-209ENST00000459904 KRTAP5-7Q6L8G8 165 aa5.17□□□□□ -1.58
LMNA-209ENST00000459904 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
LMNA-209ENST00000459904 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
LMNA-209ENST00000459904 KRTAP23-1A1A580 65 aa5.06□□□□□ -1.6
LMNA-209ENST00000459904 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
LMNA-209ENST00000459904 KRTAP5-5Q701N2 237 aaPredicted RBP4.95□□□□□ -1.62
LMNA-209ENST00000459904 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
LMNA-209ENST00000459904 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
LMNA-209ENST00000459904 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
LMNA-209ENST00000459904 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
LMNA-209ENST00000459904 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
LMNA-209ENST00000459904 KTN1-AS1Q86SY8 53 aa4.81□□□□□ -1.64
LMNA-209ENST00000459904 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
LMNA-209ENST00000459904 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
LMNA-209ENST00000459904 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
LMNA-209ENST00000459904 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
LMNA-209ENST00000459904 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
LMNA-209ENST00000459904 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
LMNA-209ENST00000459904 KRTAP5-2Q701N4 177 aa4.58□□□□□ -1.68
LMNA-209ENST00000459904 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
LMNA-209ENST00000459904 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
LMNA-209ENST00000459904 MT1AP04731 61 aa4.5□□□□□ -1.69
LMNA-209ENST00000459904 AHNAKQ09666 5890 aaKnown RBP4.5□□□□□ -1.69
LMNA-209ENST00000459904 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
LMNA-209ENST00000459904 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
LMNA-209ENST00000459904 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
LMNA-209ENST00000459904 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
LMNA-209ENST00000459904 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
LMNA-209ENST00000459904 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
LMNA-209ENST00000459904 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
LMNA-209ENST00000459904 MT3P25713 68 aa4.1□□□□□ -1.75
LMNA-209ENST00000459904 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
LMNA-209ENST00000459904 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
LMNA-209ENST00000459904 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
LMNA-209ENST00000459904 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
LMNA-209ENST00000459904 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
LMNA-209ENST00000459904 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
LMNA-209ENST00000459904 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
LMNA-209ENST00000459904 H3BS24 57 aa3.48□□□□□ -1.85
LMNA-209ENST00000459904 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
LMNA-209ENST00000459904 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
LMNA-209ENST00000459904 LCE3EQ5T5B0 92 aa3.28□□□□□ -1.88
LMNA-209ENST00000459904 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
LMNA-209ENST00000459904 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
LMNA-209ENST00000459904 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
LMNA-209ENST00000459904 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
LMNA-209ENST00000459904 INE1O15225 51 aa3.04□□□□□ -1.92
LMNA-209ENST00000459904 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
LMNA-209ENST00000459904 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
LMNA-209ENST00000459904 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
LMNA-209ENST00000459904 PRM1P04553 51 aa2.72□□□□□ -1.97
LMNA-209ENST00000459904 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
LMNA-209ENST00000459904 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 20.2 ms