RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
COL18A1-206ENST00000459895 MT1LQ93083 61 aa4.6□□□□□ -1.67
COL18A1-206ENST00000459895 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
COL18A1-206ENST00000459895 ROMO1P60602 79 aa4.58□□□□□ -1.68
COL18A1-206ENST00000459895 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
COL18A1-206ENST00000459895 MT1GP13640 62 aa4.53□□□□□ -1.68
COL18A1-206ENST00000459895 MT1MQ8N339 61 aa4.53□□□□□ -1.68
COL18A1-206ENST00000459895 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
COL18A1-206ENST00000459895 BRK1Q8WUW1 75 aa4.5□□□□□ -1.69
COL18A1-206ENST00000459895 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
COL18A1-206ENST00000459895 KRTAP2-1Q9BYU5 128 aa4.49□□□□□ -1.69
COL18A1-206ENST00000459895 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
COL18A1-206ENST00000459895 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
COL18A1-206ENST00000459895 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
COL18A1-206ENST00000459895 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
COL18A1-206ENST00000459895 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
COL18A1-206ENST00000459895 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
COL18A1-206ENST00000459895 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
COL18A1-206ENST00000459895 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
COL18A1-206ENST00000459895 KRTAP4-9Q9BYQ8 210 aa4.18□□□□□ -1.74
COL18A1-206ENST00000459895 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
COL18A1-206ENST00000459895 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
COL18A1-206ENST00000459895 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
COL18A1-206ENST00000459895 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
COL18A1-206ENST00000459895 LCE1DQ5T752 114 aa4.13□□□□□ -1.75
COL18A1-206ENST00000459895 MT4P47944 62 aa4.11□□□□□ -1.75
COL18A1-206ENST00000459895 PRO0628Q9UI54 55 aa4.11□□□□□ -1.75
COL18A1-206ENST00000459895 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
COL18A1-206ENST00000459895 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
COL18A1-206ENST00000459895 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
COL18A1-206ENST00000459895 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
COL18A1-206ENST00000459895 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
COL18A1-206ENST00000459895 MT1AP04731 61 aa3.91□□□□□ -1.78
COL18A1-206ENST00000459895 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
COL18A1-206ENST00000459895 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
COL18A1-206ENST00000459895 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
COL18A1-206ENST00000459895 KRTAP6-1Q3LI64 71 aa3.89□□□□□ -1.79
COL18A1-206ENST00000459895 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
COL18A1-206ENST00000459895 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
COL18A1-206ENST00000459895 GPR98Q8WXG9 6306 aa3.87□□□□□ -1.79
COL18A1-206ENST00000459895 KRTAP5-3Q6L8H2 238 aa3.78□□□□□ -1.8
COL18A1-206ENST00000459895 SVIPQ8NHG7 77 aa3.73□□□□□ -1.81
COL18A1-206ENST00000459895 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
COL18A1-206ENST00000459895 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
COL18A1-206ENST00000459895 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
COL18A1-206ENST00000459895 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
COL18A1-206ENST00000459895 MT3P25713 68 aa3.52□□□□□ -1.85
COL18A1-206ENST00000459895 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
COL18A1-206ENST00000459895 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
COL18A1-206ENST00000459895 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
COL18A1-206ENST00000459895 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
COL18A1-206ENST00000459895 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
COL18A1-206ENST00000459895 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
COL18A1-206ENST00000459895 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
COL18A1-206ENST00000459895 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
COL18A1-206ENST00000459895 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
COL18A1-206ENST00000459895 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
COL18A1-206ENST00000459895 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
COL18A1-206ENST00000459895 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
COL18A1-206ENST00000459895 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
COL18A1-206ENST00000459895 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
COL18A1-206ENST00000459895 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
COL18A1-206ENST00000459895 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
COL18A1-206ENST00000459895 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
COL18A1-206ENST00000459895 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
COL18A1-206ENST00000459895 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
COL18A1-206ENST00000459895 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
COL18A1-206ENST00000459895 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
COL18A1-206ENST00000459895 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
COL18A1-206ENST00000459895 PRM1P04553 51 aa2.39□□□□□ -2.03
COL18A1-206ENST00000459895 A0A0A0MQY5 61 aa2.37□□□□□ -2.03
COL18A1-206ENST00000459895 INE1O15225 51 aa2.34□□□□□ -2.03
COL18A1-206ENST00000459895 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
COL18A1-206ENST00000459895 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
COL18A1-206ENST00000459895 H3BS24 57 aa2.21□□□□□ -2.06
COL18A1-206ENST00000459895 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.09
COL18A1-206ENST00000459895 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
COL18A1-206ENST00000459895 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 77.4 ms