RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
HDAC7-217ENST00000459625 HERC1Q15751 4861 aa4.74□□□□□ -1.65
HDAC7-217ENST00000459625 HYDINQ4G0P3 5121 aa4.71□□□□□ -1.66
HDAC7-217ENST00000459625 KIAA1109Q2LD37 5005 aa4.66□□□□□ -1.66
HDAC7-217ENST00000459625 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
HDAC7-217ENST00000459625 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
HDAC7-217ENST00000459625 LRP2P98164 4655 aa4.63□□□□□ -1.67
HDAC7-217ENST00000459625 HERC2O95714 4834 aa4.59□□□□□ -1.68
HDAC7-217ENST00000459625 RYR2Q92736 4967 aa4.55□□□□□ -1.68
HDAC7-217ENST00000459625 TNXBP22105 4242 aa4.54□□□□□ -1.68
HDAC7-217ENST00000459625 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
HDAC7-217ENST00000459625 PCLOQ9Y6V0 5065 aa4.51□□□□□ -1.69
HDAC7-217ENST00000459625 MT1AP04731 61 aa4.49□□□□□ -1.69
HDAC7-217ENST00000459625 KRTAP19-2Q3LHN2 52 aa4.47□□□□□ -1.69
HDAC7-217ENST00000459625 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
HDAC7-217ENST00000459625 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
HDAC7-217ENST00000459625 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
HDAC7-217ENST00000459625 KRTAP6-2Q3LI66 62 aa4.45□□□□□ -1.7
HDAC7-217ENST00000459625 KMT2CQ8NEZ4 4911 aaKnown RBP4.44□□□□□ -1.7
HDAC7-217ENST00000459625 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
HDAC7-217ENST00000459625 BIRC6Q9NR09 4857 aa4.38□□□□□ -1.71
HDAC7-217ENST00000459625 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
HDAC7-217ENST00000459625 EPPK1P58107 5090 aaKnown RBP4.35□□□□□ -1.71
HDAC7-217ENST00000459625 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
HDAC7-217ENST00000459625 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
HDAC7-217ENST00000459625 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
HDAC7-217ENST00000459625 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
HDAC7-217ENST00000459625 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
HDAC7-217ENST00000459625 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
HDAC7-217ENST00000459625 LCE4AQ5TA78 99 aa4.22□□□□□ -1.73
HDAC7-217ENST00000459625 LCE2AQ5TA79 106 aaPredicted RBP4.22□□□□□ -1.73
HDAC7-217ENST00000459625 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
HDAC7-217ENST00000459625 MUC2Q02817 5179 aa4.1□□□□□ -1.75
HDAC7-217ENST00000459625 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
HDAC7-217ENST00000459625 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
HDAC7-217ENST00000459625 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
HDAC7-217ENST00000459625 ABCA13Q86UQ4 5058 aa3.98□□□□□ -1.77
HDAC7-217ENST00000459625 FAT4Q6V0I7 4981 aa3.94□□□□□ -1.78
HDAC7-217ENST00000459625 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
HDAC7-217ENST00000459625 UBR4Q5T4S7 5183 aa3.88□□□□□ -1.79
HDAC7-217ENST00000459625 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
HDAC7-217ENST00000459625 RNF213Q63HN8 5207 aa3.83□□□□□ -1.8
HDAC7-217ENST00000459625 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
HDAC7-217ENST00000459625 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
HDAC7-217ENST00000459625 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
HDAC7-217ENST00000459625 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
HDAC7-217ENST00000459625 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
HDAC7-217ENST00000459625 DSTQ03001 7570 aaKnown RBP3.56□□□□□ -1.84
HDAC7-217ENST00000459625 KMT2DO14686 5537 aa3.54□□□□□ -1.84
HDAC7-217ENST00000459625 MACF1Q9UPN3 7388 aaKnown RBP3.54□□□□□ -1.84
HDAC7-217ENST00000459625 FCGBPQ9Y6R7 5405 aaPredicted RBP3.45□□□□□ -1.86
HDAC7-217ENST00000459625 NEBP20929 6669 aa3.41□□□□□ -1.86
HDAC7-217ENST00000459625 USH2AO75445 5202 aa3.4□□□□□ -1.87
HDAC7-217ENST00000459625 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
HDAC7-217ENST00000459625 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
HDAC7-217ENST00000459625 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
HDAC7-217ENST00000459625 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
HDAC7-217ENST00000459625 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
HDAC7-217ENST00000459625 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
HDAC7-217ENST00000459625 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
HDAC7-217ENST00000459625 PHGR1C9JFL3 82 aa2.81□□□□□ -1.96
HDAC7-217ENST00000459625 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
HDAC7-217ENST00000459625 KRTAP5-3Q6L8H2 238 aa2.79□□□□□ -1.96
HDAC7-217ENST00000459625 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
HDAC7-217ENST00000459625 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
HDAC7-217ENST00000459625 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
HDAC7-217ENST00000459625 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
HDAC7-217ENST00000459625 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
HDAC7-217ENST00000459625 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
HDAC7-217ENST00000459625 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
HDAC7-217ENST00000459625 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
HDAC7-217ENST00000459625 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
HDAC7-217ENST00000459625 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
HDAC7-217ENST00000459625 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
HDAC7-217ENST00000459625 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.12
HDAC7-217ENST00000459625 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
HDAC7-217ENST00000459625 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
HDAC7-217ENST00000459625 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 66.8 ms