RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
AMBRA1-202ENST00000458649 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
AMBRA1-202ENST00000458649 MT1LQ93083 61 aa3.53□□□□□ -1.84
AMBRA1-202ENST00000458649 MT1EP04732 61 aa3.52□□□□□ -1.85
AMBRA1-202ENST00000458649 KRTAP4-7Q9BYR0 210 aa3.47□□□□□ -1.85
AMBRA1-202ENST00000458649 MUC2Q02817 5179 aa3.45□□□□□ -1.86
AMBRA1-202ENST00000458649 FSIP2Q5CZC0 6907 aa3.44□□□□□ -1.86
AMBRA1-202ENST00000458649 MT1MQ8N339 61 aa3.42□□□□□ -1.86
AMBRA1-202ENST00000458649 MT3P25713 68 aa3.42□□□□□ -1.86
AMBRA1-202ENST00000458649 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.86
AMBRA1-202ENST00000458649 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.87
AMBRA1-202ENST00000458649 KRTAP9-7A8MTY7 169 aa3.38□□□□□ -1.87
AMBRA1-202ENST00000458649 MT4P47944 62 aa3.38□□□□□ -1.87
AMBRA1-202ENST00000458649 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
AMBRA1-202ENST00000458649 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
AMBRA1-202ENST00000458649 PRM1P04553 51 aa3.35□□□□□ -1.87
AMBRA1-202ENST00000458649 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
AMBRA1-202ENST00000458649 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
AMBRA1-202ENST00000458649 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
AMBRA1-202ENST00000458649 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
AMBRA1-202ENST00000458649 LOC100996750A0A140TA64 210 aa3.25□□□□□ -1.89
AMBRA1-202ENST00000458649 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.23□□□□□ -1.89
AMBRA1-202ENST00000458649 MT1AP04731 61 aa3.22□□□□□ -1.89
AMBRA1-202ENST00000458649 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
AMBRA1-202ENST00000458649 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
AMBRA1-202ENST00000458649 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
AMBRA1-202ENST00000458649 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
AMBRA1-202ENST00000458649 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
AMBRA1-202ENST00000458649 USH2AO75445 5202 aa3.11□□□□□ -1.91
AMBRA1-202ENST00000458649 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.91
AMBRA1-202ENST00000458649 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.92
AMBRA1-202ENST00000458649 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
AMBRA1-202ENST00000458649 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
AMBRA1-202ENST00000458649 KRTAP4-9Q9BYQ8 210 aa2.96□□□□□ -1.94
AMBRA1-202ENST00000458649 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
AMBRA1-202ENST00000458649 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
AMBRA1-202ENST00000458649 FCGBPQ9Y6R7 5405 aaPredicted RBP2.94□□□□□ -1.94
AMBRA1-202ENST00000458649 KMT2DO14686 5537 aa2.92□□□□□ -1.94
AMBRA1-202ENST00000458649 DSTQ03001 7570 aaKnown RBP2.89□□□□□ -1.95
AMBRA1-202ENST00000458649 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
AMBRA1-202ENST00000458649 SSPOA2VEC9 5147 aa2.85□□□□□ -1.95
AMBRA1-202ENST00000458649 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
AMBRA1-202ENST00000458649 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
AMBRA1-202ENST00000458649 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
AMBRA1-202ENST00000458649 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
AMBRA1-202ENST00000458649 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
AMBRA1-202ENST00000458649 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
AMBRA1-202ENST00000458649 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
AMBRA1-202ENST00000458649 NEBP20929 6669 aa2.72□□□□□ -1.97
AMBRA1-202ENST00000458649 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
AMBRA1-202ENST00000458649 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
AMBRA1-202ENST00000458649 MDN1Q9NU22 5596 aa2.55□□□□□ -2
AMBRA1-202ENST00000458649 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
AMBRA1-202ENST00000458649 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
AMBRA1-202ENST00000458649 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
AMBRA1-202ENST00000458649 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
AMBRA1-202ENST00000458649 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
AMBRA1-202ENST00000458649 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
AMBRA1-202ENST00000458649 AHNAK2Q8IVF2 5795 aa2.15□□□□□ -2.06
AMBRA1-202ENST00000458649 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
AMBRA1-202ENST00000458649 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
AMBRA1-202ENST00000458649 MUC5ACP98088 5654 aa2.08□□□□□ -2.08
AMBRA1-202ENST00000458649 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
AMBRA1-202ENST00000458649 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
AMBRA1-202ENST00000458649 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
AMBRA1-202ENST00000458649 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
AMBRA1-202ENST00000458649 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.12
AMBRA1-202ENST00000458649 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
AMBRA1-202ENST00000458649 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
AMBRA1-202ENST00000458649 KRTAP5-1Q6L8H4 278 aa1.74□□□□□ -2.13
AMBRA1-202ENST00000458649 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
AMBRA1-202ENST00000458649 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
AMBRA1-202ENST00000458649 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
AMBRA1-202ENST00000458649 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
AMBRA1-202ENST00000458649 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.59□□□□□ -2.15
AMBRA1-202ENST00000458649 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
AMBRA1-202ENST00000458649 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms