RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 KRTAP2-4Q9BYR9 128 aa4.85□□□□□ -1.63
SCFD1-203ENST00000458591 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
SCFD1-203ENST00000458591 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
SCFD1-203ENST00000458591 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-203ENST00000458591 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
SCFD1-203ENST00000458591 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
SCFD1-203ENST00000458591 MT1GP13640 62 aa4.65□□□□□ -1.67
SCFD1-203ENST00000458591 DSTQ03001 7570 aaKnown RBP4.64□□□□□ -1.67
SCFD1-203ENST00000458591 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
SCFD1-203ENST00000458591 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
SCFD1-203ENST00000458591 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-203ENST00000458591 KRTAP9-6A0A140TA67 174 aa4.56□□□□□ -1.68
SCFD1-203ENST00000458591 MT1MQ8N339 61 aa4.55□□□□□ -1.68
SCFD1-203ENST00000458591 KRTAP4-12Q9BQ66 201 aa4.52□□□□□ -1.69
SCFD1-203ENST00000458591 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
SCFD1-203ENST00000458591 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
SCFD1-203ENST00000458591 MACF1Q9UPN3 7388 aaKnown RBP4.4□□□□□ -1.7
SCFD1-203ENST00000458591 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
SCFD1-203ENST00000458591 KRTAP9-9Q9BYP9 154 aa4.36□□□□□ -1.71
SCFD1-203ENST00000458591 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
SCFD1-203ENST00000458591 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
SCFD1-203ENST00000458591 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
SCFD1-203ENST00000458591 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
SCFD1-203ENST00000458591 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
SCFD1-203ENST00000458591 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
SCFD1-203ENST00000458591 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
SCFD1-203ENST00000458591 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
SCFD1-203ENST00000458591 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
SCFD1-203ENST00000458591 MT1AP04731 61 aa4.11□□□□□ -1.75
SCFD1-203ENST00000458591 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
SCFD1-203ENST00000458591 OBSCNQ5VST9 7968 aa4□□□□□ -1.77
SCFD1-203ENST00000458591 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
SCFD1-203ENST00000458591 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
SCFD1-203ENST00000458591 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-203ENST00000458591 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
SCFD1-203ENST00000458591 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
SCFD1-203ENST00000458591 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
SCFD1-203ENST00000458591 SPRR2EP22531 72 aa3.94□□□□□ -1.78
SCFD1-203ENST00000458591 SPRR2BP35325 72 aa3.94□□□□□ -1.78
SCFD1-203ENST00000458591 SPRR2AP35326 72 aa3.94□□□□□ -1.78
SCFD1-203ENST00000458591 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
SCFD1-203ENST00000458591 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
SCFD1-203ENST00000458591 PRM1P04553 51 aa3.86□□□□□ -1.79
SCFD1-203ENST00000458591 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
SCFD1-203ENST00000458591 SPRR2DP22532 72 aa3.75□□□□□ -1.81
SCFD1-203ENST00000458591 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
SCFD1-203ENST00000458591 MT3P25713 68 aa3.61□□□□□ -1.83
SCFD1-203ENST00000458591 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
SCFD1-203ENST00000458591 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
SCFD1-203ENST00000458591 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
SCFD1-203ENST00000458591 MT4P47944 62 aa3.41□□□□□ -1.86
SCFD1-203ENST00000458591 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
SCFD1-203ENST00000458591 NEBP20929 6669 aa3.38□□□□□ -1.87
SCFD1-203ENST00000458591 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
SCFD1-203ENST00000458591 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
SCFD1-203ENST00000458591 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
SCFD1-203ENST00000458591 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
SCFD1-203ENST00000458591 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
SCFD1-203ENST00000458591 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
SCFD1-203ENST00000458591 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
SCFD1-203ENST00000458591 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
SCFD1-203ENST00000458591 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
SCFD1-203ENST00000458591 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
SCFD1-203ENST00000458591 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-203ENST00000458591 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
SCFD1-203ENST00000458591 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
SCFD1-203ENST00000458591 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
SCFD1-203ENST00000458591 KRTAP5-8O75690 187 aa2.57□□□□□ -2
SCFD1-203ENST00000458591 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
SCFD1-203ENST00000458591 AHNAK2Q8IVF2 5795 aa2.52□□□□□ -2.01
SCFD1-203ENST00000458591 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.01
SCFD1-203ENST00000458591 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
SCFD1-203ENST00000458591 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
SCFD1-203ENST00000458591 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
SCFD1-203ENST00000458591 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
SCFD1-203ENST00000458591 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
SCFD1-203ENST00000458591 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 88.5 ms