RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 PSPHP1O15172 72 aa8.43□□□□□ -1.06
CBX3-204ENST00000456948 KRTAP4-6Q9BYQ5 205 aa8.43□□□□□ -1.06
CBX3-204ENST00000456948 LCE3AQ5TA76 89 aa8.41□□□□□ -1.06
CBX3-204ENST00000456948 PP632Q6XCG6 107 aa8.4□□□□□ -1.06
CBX3-204ENST00000456948 MT1GP13640 62 aa8.39□□□□□ -1.07
CBX3-204ENST00000456948 DSTQ03001 7570 aaKnown RBP8.28□□□□□ -1.08
CBX3-204ENST00000456948 KRTAP25-1Q3LHN0 102 aa8.25□□□□□ -1.09
CBX3-204ENST00000456948 MT1LQ93083 61 aa8.24□□□□□ -1.09
CBX3-204ENST00000456948 A6NED7 52 aa8.22□□□□□ -1.09
CBX3-204ENST00000456948 MT1MQ8N339 61 aa8.17□□□□□ -1.1
CBX3-204ENST00000456948 KRTAP12-3P60328 96 aa8.16□□□□□ -1.1
CBX3-204ENST00000456948 KRTAP4-9Q9BYQ8 210 aa8.12□□□□□ -1.11
CBX3-204ENST00000456948 GPR98Q8WXG9 6306 aa8.01□□□□□ -1.13
CBX3-204ENST00000456948 CDC42SE1Q9NRR8 79 aa7.97□□□□□ -1.13
CBX3-204ENST00000456948 KRTAP23-1A1A580 65 aa7.96□□□□□ -1.14
CBX3-204ENST00000456948 LCE1DQ5T752 114 aa7.89□□□□□ -1.15
CBX3-204ENST00000456948 KRTAP4-3Q9BYR4 195 aa7.89□□□□□ -1.15
CBX3-204ENST00000456948 LCE4AQ5TA78 99 aa7.87□□□□□ -1.15
CBX3-204ENST00000456948 MT4P47944 62 aa7.84□□□□□ -1.15
CBX3-204ENST00000456948 KRTAP19-4Q3LI73 84 aa7.84□□□□□ -1.15
CBX3-204ENST00000456948 ROMO1P60602 79 aa7.82□□□□□ -1.16
CBX3-204ENST00000456948 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
CBX3-204ENST00000456948 HMCN1Q96RW7 5635 aa7.7□□□□□ -1.18
CBX3-204ENST00000456948 KRTAP15-1Q3LI76 137 aa7.69□□□□□ -1.18
CBX3-204ENST00000456948 KRTAP5-4Q6L8H1 288 aa7.67□□□□□ -1.18
CBX3-204ENST00000456948 LCE3CQ5T5A8 94 aa7.51□□□□□ -1.21
CBX3-204ENST00000456948 BRK1Q8WUW1 75 aa7.5□□□□□ -1.21
CBX3-204ENST00000456948 AHNAK2Q8IVF2 5795 aa7.47□□□□□ -1.21
CBX3-204ENST00000456948 KRTAP5-5Q701N2 237 aaPredicted RBP7.43□□□□□ -1.22
CBX3-204ENST00000456948 KRTAP12-4P60329 112 aa7.37□□□□□ -1.23
CBX3-204ENST00000456948 KRTAP5-10Q6L8G5 202 aa7.32□□□□□ -1.24
CBX3-204ENST00000456948 KRTAP4-12Q9BQ66 201 aa7.3□□□□□ -1.24
CBX3-204ENST00000456948 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
CBX3-204ENST00000456948 KRTAP20-2Q3LI61 65 aa7.26□□□□□ -1.25
CBX3-204ENST00000456948 KRTAP5-3Q6L8H2 238 aa7.16□□□□□ -1.26
CBX3-204ENST00000456948 KRTAP9-9Q9BYP9 154 aa7.16□□□□□ -1.26
CBX3-204ENST00000456948 KRTAP9-4Q9BYQ2 154 aa7.16□□□□□ -1.26
CBX3-204ENST00000456948 SYNE1Q8NF91 8797 aaKnown RBP7.09□□□□□ -1.27
CBX3-204ENST00000456948 PMAIP1Q13794 54 aa7.08□□□□□ -1.28
CBX3-204ENST00000456948 KRTAP5-7Q6L8G8 165 aa7.05□□□□□ -1.28
CBX3-204ENST00000456948 MT1AP04731 61 aa7.04□□□□□ -1.28
CBX3-204ENST00000456948 PRO0628Q9UI54 55 aa6.97□□□□□ -1.29
CBX3-204ENST00000456948 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
CBX3-204ENST00000456948 KRTAP6-1Q3LI64 71 aa6.94□□□□□ -1.3
CBX3-204ENST00000456948 KRTAP5-2Q701N4 177 aa6.74□□□□□ -1.33
CBX3-204ENST00000456948 KRTAP4-11Q9BYQ6 195 aa6.66□□□□□ -1.34
CBX3-204ENST00000456948 KRTAP6-2Q3LI66 62 aa6.62□□□□□ -1.35
CBX3-204ENST00000456948 PRAC1Q96KF2 57 aa6.61□□□□□ -1.35
CBX3-204ENST00000456948 KTN1-AS1Q86SY8 53 aa6.58□□□□□ -1.36
CBX3-204ENST00000456948 KRTAP4-2Q9BYR5 136 aa6.55□□□□□ -1.36
CBX3-204ENST00000456948 MT3P25713 68 aa6.5□□□□□ -1.37
CBX3-204ENST00000456948 KRTAP5-8O75690 187 aa6.41□□□□□ -1.38
CBX3-204ENST00000456948 OBSCNQ5VST9 7968 aa6.32□□□□□ -1.4
CBX3-204ENST00000456948 SVIPQ8NHG7 77 aa6.24□□□□□ -1.41
CBX3-204ENST00000456948 MUC5ACP98088 5654 aa6.12□□□□□ -1.43
CBX3-204ENST00000456948 AHNAKQ09666 5890 aaKnown RBP6.12□□□□□ -1.43
CBX3-204ENST00000456948 MUC5BQ9HC84 5762 aaPredicted RBP6.12□□□□□ -1.43
CBX3-204ENST00000456948 KRTAP5-1Q6L8H4 278 aa6.02□□□□□ -1.45
CBX3-204ENST00000456948 LCE1EQ5T753 118 aa5.91□□□□□ -1.46
CBX3-204ENST00000456948 LUZP6Q538Z0 58 aa5.7□□□□□ -1.5
CBX3-204ENST00000456948 H3BS24 57 aa5.68□□□□□ -1.5
CBX3-204ENST00000456948 LCE1BQ5T7P3 118 aa5.53□□□□□ -1.52
CBX3-204ENST00000456948 LCE3DQ9BYE3 92 aa5.49□□□□□ -1.53
CBX3-204ENST00000456948 LCE1CQ5T751 118 aa5.46□□□□□ -1.54
CBX3-204ENST00000456948 LCE3EQ5T5B0 92 aa5.2□□□□□ -1.58
CBX3-204ENST00000456948 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
CBX3-204ENST00000456948 KRTAP5-11Q6L8G4 156 aa4.91□□□□□ -1.62
CBX3-204ENST00000456948 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
CBX3-204ENST00000456948 LCE1FQ5T754 118 aa4.81□□□□□ -1.64
CBX3-204ENST00000456948 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
CBX3-204ENST00000456948 KRTAP21-2Q3LI59 83 aa4.56□□□□□ -1.68
CBX3-204ENST00000456948 PHGR1C9JFL3 82 aa4.31□□□□□ -1.72
CBX3-204ENST00000456948 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
CBX3-204ENST00000456948 INE1O15225 51 aa4.14□□□□□ -1.75
CBX3-204ENST00000456948 PRM1P04553 51 aa3.96□□□□□ -1.78
CBX3-204ENST00000456948 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.78
CBX3-204ENST00000456948 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
CBX3-204ENST00000456948 MUC16Q8WXI7 14507 aa2.8□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms