RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 KRTAP4-3Q9BYR4 195 aa5.71□□□□□ -1.5
PTPN6-204ENST00000456013 LCE2DQ5TA82 110 aaPredicted RBP5.7□□□□□ -1.5
PTPN6-204ENST00000456013 MT1GP13640 62 aa5.67□□□□□ -1.5
PTPN6-204ENST00000456013 MT1MQ8N339 61 aa5.66□□□□□ -1.5
PTPN6-204ENST00000456013 KRTAP19-3Q7Z4W3 81 aa5.65□□□□□ -1.5
PTPN6-204ENST00000456013 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
PTPN6-204ENST00000456013 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
PTPN6-204ENST00000456013 KRTAP9-2Q9BYQ4 174 aa5.48□□□□□ -1.53
PTPN6-204ENST00000456013 MUC12Q9UKN1 5478 aa5.47□□□□□ -1.53
PTPN6-204ENST00000456013 FSIP2Q5CZC0 6907 aa5.46□□□□□ -1.54
PTPN6-204ENST00000456013 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
PTPN6-204ENST00000456013 KRTAP12-4P60329 112 aa5.43□□□□□ -1.54
PTPN6-204ENST00000456013 SPRR2FQ96RM1 72 aa5.35□□□□□ -1.55
PTPN6-204ENST00000456013 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
PTPN6-204ENST00000456013 MT1AP04731 61 aa5.21□□□□□ -1.57
PTPN6-204ENST00000456013 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
PTPN6-204ENST00000456013 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
PTPN6-204ENST00000456013 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
PTPN6-204ENST00000456013 KRTAP9-6A0A140TA67 174 aa5.08□□□□□ -1.6
PTPN6-204ENST00000456013 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
PTPN6-204ENST00000456013 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
PTPN6-204ENST00000456013 KRTAP5-5Q701N2 237 aaPredicted RBP5□□□□□ -1.61
PTPN6-204ENST00000456013 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
PTPN6-204ENST00000456013 LCE3EQ5T5B0 92 aa4.99□□□□□ -1.61
PTPN6-204ENST00000456013 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
PTPN6-204ENST00000456013 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
PTPN6-204ENST00000456013 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.89□□□□□ -1.63
PTPN6-204ENST00000456013 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
PTPN6-204ENST00000456013 KRTAP9-7A8MTY7 169 aa4.85□□□□□ -1.63
PTPN6-204ENST00000456013 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
PTPN6-204ENST00000456013 SPRR2EP22531 72 aa4.83□□□□□ -1.64
PTPN6-204ENST00000456013 SPRR2BP35325 72 aa4.83□□□□□ -1.64
PTPN6-204ENST00000456013 SPRR2AP35326 72 aa4.83□□□□□ -1.64
PTPN6-204ENST00000456013 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
PTPN6-204ENST00000456013 PRM1P04553 51 aa4.81□□□□□ -1.64
PTPN6-204ENST00000456013 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
PTPN6-204ENST00000456013 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
PTPN6-204ENST00000456013 SPRR2DP22532 72 aa4.61□□□□□ -1.67
PTPN6-204ENST00000456013 MT3P25713 68 aa4.6□□□□□ -1.67
PTPN6-204ENST00000456013 NEBP20929 6669 aa4.4□□□□□ -1.71
PTPN6-204ENST00000456013 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
PTPN6-204ENST00000456013 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
PTPN6-204ENST00000456013 KRTAP2-2Q9BYT5 123 aa4.26□□□□□ -1.73
PTPN6-204ENST00000456013 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
PTPN6-204ENST00000456013 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
PTPN6-204ENST00000456013 KRTAP5-2Q701N4 177 aa4.09□□□□□ -1.76
PTPN6-204ENST00000456013 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
PTPN6-204ENST00000456013 MT4P47944 62 aa4.05□□□□□ -1.76
PTPN6-204ENST00000456013 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
PTPN6-204ENST00000456013 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
PTPN6-204ENST00000456013 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
PTPN6-204ENST00000456013 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
PTPN6-204ENST00000456013 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
PTPN6-204ENST00000456013 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
PTPN6-204ENST00000456013 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
PTPN6-204ENST00000456013 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
PTPN6-204ENST00000456013 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
PTPN6-204ENST00000456013 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
PTPN6-204ENST00000456013 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
PTPN6-204ENST00000456013 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
PTPN6-204ENST00000456013 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
PTPN6-204ENST00000456013 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
PTPN6-204ENST00000456013 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
PTPN6-204ENST00000456013 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
PTPN6-204ENST00000456013 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
PTPN6-204ENST00000456013 KRTAP5-7Q6L8G8 165 aa3.17□□□□□ -1.9
PTPN6-204ENST00000456013 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
PTPN6-204ENST00000456013 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
PTPN6-204ENST00000456013 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
PTPN6-204ENST00000456013 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
PTPN6-204ENST00000456013 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
PTPN6-204ENST00000456013 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
PTPN6-204ENST00000456013 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
PTPN6-204ENST00000456013 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
PTPN6-204ENST00000456013 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
PTPN6-204ENST00000456013 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
PTPN6-204ENST00000456013 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 143.3 ms