RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 FCGBPQ9Y6R7 5405 aaPredicted RBP5.89□□□□□ -1.47
CCDC144A-210ENST00000456009 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
CCDC144A-210ENST00000456009 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
CCDC144A-210ENST00000456009 MUC12Q9UKN1 5478 aa5.83□□□□□ -1.48
CCDC144A-210ENST00000456009 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
CCDC144A-210ENST00000456009 MT1GP13640 62 aa5.74□□□□□ -1.49
CCDC144A-210ENST00000456009 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.49
CCDC144A-210ENST00000456009 MT1MQ8N339 61 aa5.71□□□□□ -1.49
CCDC144A-210ENST00000456009 CRCT1Q9UGL9 99 aa5.62□□□□□ -1.51
CCDC144A-210ENST00000456009 DSTQ03001 7570 aaKnown RBP5.62□□□□□ -1.51
CCDC144A-210ENST00000456009 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
CCDC144A-210ENST00000456009 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
CCDC144A-210ENST00000456009 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
CCDC144A-210ENST00000456009 SYNE2Q8WXH0 6885 aaKnown RBP5.32□□□□□ -1.56
CCDC144A-210ENST00000456009 MDN1Q9NU22 5596 aa5.3□□□□□ -1.56
CCDC144A-210ENST00000456009 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
CCDC144A-210ENST00000456009 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
CCDC144A-210ENST00000456009 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
CCDC144A-210ENST00000456009 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
CCDC144A-210ENST00000456009 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
CCDC144A-210ENST00000456009 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
CCDC144A-210ENST00000456009 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
CCDC144A-210ENST00000456009 KRTAP5-9P26371 169 aa5.14□□□□□ -1.59
CCDC144A-210ENST00000456009 MT1AP04731 61 aa5.1□□□□□ -1.59
CCDC144A-210ENST00000456009 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
CCDC144A-210ENST00000456009 SPRR2EP22531 72 aa5.05□□□□□ -1.6
CCDC144A-210ENST00000456009 SPRR2BP35325 72 aa5.05□□□□□ -1.6
CCDC144A-210ENST00000456009 SPRR2AP35326 72 aa5.05□□□□□ -1.6
CCDC144A-210ENST00000456009 LCE3DQ9BYE3 92 aa4.94□□□□□ -1.62
CCDC144A-210ENST00000456009 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
CCDC144A-210ENST00000456009 KRTAP4-6Q9BYQ5 205 aa4.84□□□□□ -1.64
CCDC144A-210ENST00000456009 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
CCDC144A-210ENST00000456009 SPRR2DP22532 72 aa4.81□□□□□ -1.64
CCDC144A-210ENST00000456009 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
CCDC144A-210ENST00000456009 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
CCDC144A-210ENST00000456009 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
CCDC144A-210ENST00000456009 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.68□□□□□ -1.66
CCDC144A-210ENST00000456009 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
CCDC144A-210ENST00000456009 PRM1P04553 51 aa4.65□□□□□ -1.66
CCDC144A-210ENST00000456009 MT3P25713 68 aa4.58□□□□□ -1.68
CCDC144A-210ENST00000456009 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
CCDC144A-210ENST00000456009 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
CCDC144A-210ENST00000456009 MT4P47944 62 aa4.3□□□□□ -1.72
CCDC144A-210ENST00000456009 NEBP20929 6669 aa4.3□□□□□ -1.72
CCDC144A-210ENST00000456009 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
CCDC144A-210ENST00000456009 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.74
CCDC144A-210ENST00000456009 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
CCDC144A-210ENST00000456009 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
CCDC144A-210ENST00000456009 KRTAP2-2Q9BYT5 123 aa4.06□□□□□ -1.76
CCDC144A-210ENST00000456009 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
CCDC144A-210ENST00000456009 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
CCDC144A-210ENST00000456009 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
CCDC144A-210ENST00000456009 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
CCDC144A-210ENST00000456009 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
CCDC144A-210ENST00000456009 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
CCDC144A-210ENST00000456009 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
CCDC144A-210ENST00000456009 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
CCDC144A-210ENST00000456009 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
CCDC144A-210ENST00000456009 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
CCDC144A-210ENST00000456009 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.84
CCDC144A-210ENST00000456009 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
CCDC144A-210ENST00000456009 KRTAP4-11Q9BYQ6 195 aa3.55□□□□□ -1.84
CCDC144A-210ENST00000456009 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
CCDC144A-210ENST00000456009 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
CCDC144A-210ENST00000456009 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
CCDC144A-210ENST00000456009 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
CCDC144A-210ENST00000456009 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
CCDC144A-210ENST00000456009 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
CCDC144A-210ENST00000456009 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
CCDC144A-210ENST00000456009 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
CCDC144A-210ENST00000456009 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
CCDC144A-210ENST00000456009 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
CCDC144A-210ENST00000456009 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
CCDC144A-210ENST00000456009 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
CCDC144A-210ENST00000456009 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
CCDC144A-210ENST00000456009 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
CCDC144A-210ENST00000456009 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 79.6 ms