RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 SEC61GP60059 68 aa4.9□□□□□ -1.63
UBE2F-219ENST00000455999 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
UBE2F-219ENST00000455999 COA5Q86WW8 74 aa4.89□□□□□ -1.63
UBE2F-219ENST00000455999 K7ERU9 68 aa4.87□□□□□ -1.63
UBE2F-219ENST00000455999 TNP1P09430 55 aa4.86□□□□□ -1.63
UBE2F-219ENST00000455999 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
UBE2F-219ENST00000455999 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
UBE2F-219ENST00000455999 A8MU10 97 aa4.8□□□□□ -1.64
UBE2F-219ENST00000455999 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
UBE2F-219ENST00000455999 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
UBE2F-219ENST00000455999 SMIM26A0A096LP01 95 aa4.74□□□□□ -1.65
UBE2F-219ENST00000455999 SERP2Q8N6R1 65 aa4.7□□□□□ -1.66
UBE2F-219ENST00000455999 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
UBE2F-219ENST00000455999 A0A1B0GU69 56 aa4.63□□□□□ -1.67
UBE2F-219ENST00000455999 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
UBE2F-219ENST00000455999 KRTAP5-8O75690 187 aa4.55□□□□□ -1.68
UBE2F-219ENST00000455999 ANAPC13Q9BS18 74 aa4.55□□□□□ -1.68
UBE2F-219ENST00000455999 H7BZZ5 65 aa4.5□□□□□ -1.69
UBE2F-219ENST00000455999 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
UBE2F-219ENST00000455999 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
UBE2F-219ENST00000455999 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
UBE2F-219ENST00000455999 MT1AP04731 61 aa4.44□□□□□ -1.7
UBE2F-219ENST00000455999 COX7CP15954 63 aa4.44□□□□□ -1.7
UBE2F-219ENST00000455999 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
UBE2F-219ENST00000455999 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.71
UBE2F-219ENST00000455999 CCDC179H3BU77 68 aa4.39□□□□□ -1.71
UBE2F-219ENST00000455999 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
UBE2F-219ENST00000455999 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
UBE2F-219ENST00000455999 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
UBE2F-219ENST00000455999 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
UBE2F-219ENST00000455999 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
UBE2F-219ENST00000455999 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
UBE2F-219ENST00000455999 KRTAP15-1Q3LI76 137 aa4.33□□□□□ -1.72
UBE2F-219ENST00000455999 PRR15LQ9BU68 103 aa4.33□□□□□ -1.72
UBE2F-219ENST00000455999 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
UBE2F-219ENST00000455999 TMEM258P61165 79 aa4.28□□□□□ -1.72
UBE2F-219ENST00000455999 LINC01558Q9Y6Z2 57 aa4.24□□□□□ -1.73
UBE2F-219ENST00000455999 PRO0628Q9UI54 55 aa4.22□□□□□ -1.73
UBE2F-219ENST00000455999 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
UBE2F-219ENST00000455999 H3BS24 57 aa4.19□□□□□ -1.74
UBE2F-219ENST00000455999 UQCR11O14957 56 aa4.19□□□□□ -1.74
UBE2F-219ENST00000455999 KRTAP5-1Q6L8H4 278 aa4.17□□□□□ -1.74
UBE2F-219ENST00000455999 V9GYY9 64 aa4.16□□□□□ -1.74
UBE2F-219ENST00000455999 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
UBE2F-219ENST00000455999 ATP5EP56381 51 aaPredicted RBP4.12□□□□□ -1.75
UBE2F-219ENST00000455999 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
UBE2F-219ENST00000455999 MT3P25713 68 aa4.05□□□□□ -1.76
UBE2F-219ENST00000455999 K7ERS5 55 aa4.03□□□□□ -1.76
UBE2F-219ENST00000455999 BRK1Q8WUW1 75 aa4.03□□□□□ -1.76
UBE2F-219ENST00000455999 PMAIP1Q13794 54 aa4□□□□□ -1.77
UBE2F-219ENST00000455999 Q1T7F1 81 aa3.9□□□□□ -1.79
UBE2F-219ENST00000455999 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
UBE2F-219ENST00000455999 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
UBE2F-219ENST00000455999 PSPHP1O15172 72 aa3.8□□□□□ -1.8
UBE2F-219ENST00000455999 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
UBE2F-219ENST00000455999 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
UBE2F-219ENST00000455999 CDC42SE1Q9NRR8 79 aa3.79□□□□□ -1.8
UBE2F-219ENST00000455999 ROMO1P60602 79 aa3.72□□□□□ -1.81
UBE2F-219ENST00000455999 A6NED7 52 aa3.7□□□□□ -1.82
UBE2F-219ENST00000455999 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
UBE2F-219ENST00000455999 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
UBE2F-219ENST00000455999 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
UBE2F-219ENST00000455999 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
UBE2F-219ENST00000455999 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
UBE2F-219ENST00000455999 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
UBE2F-219ENST00000455999 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
UBE2F-219ENST00000455999 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
UBE2F-219ENST00000455999 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
UBE2F-219ENST00000455999 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
UBE2F-219ENST00000455999 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
UBE2F-219ENST00000455999 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
UBE2F-219ENST00000455999 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
UBE2F-219ENST00000455999 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
UBE2F-219ENST00000455999 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
UBE2F-219ENST00000455999 INE1O15225 51 aa2.63□□□□□ -1.99
UBE2F-219ENST00000455999 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
UBE2F-219ENST00000455999 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
UBE2F-219ENST00000455999 PRM1P04553 51 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 293.7 ms