RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 A0A0D9SG42 100 aa1.73□□□□□ -2.13
GTF3C3-208ENST00000455546 LUZP6Q538Z0 58 aa1.73□□□□□ -2.13
GTF3C3-208ENST00000455546 KRTAP19-3Q7Z4W3 81 aa1.73□□□□□ -2.13
GTF3C3-208ENST00000455546 SPRR5A0A1B0GTR4 108 aa1.72□□□□□ -2.13
GTF3C3-208ENST00000455546 PSPHP1O15172 72 aa1.72□□□□□ -2.13
GTF3C3-208ENST00000455546 SPANXA2-OT1Q8N9U9 137 aa1.72□□□□□ -2.13
GTF3C3-208ENST00000455546 KRTAP19-5Q3LI72 72 aa1.71□□□□□ -2.14
GTF3C3-208ENST00000455546 SPATA8Q6RVD6 105 aa1.71□□□□□ -2.14
GTF3C3-208ENST00000455546 SMIM20Q8N5G0 67 aa1.71□□□□□ -2.14
GTF3C3-208ENST00000455546 SPINT4Q6UDR6 99 aa1.7□□□□□ -2.14
GTF3C3-208ENST00000455546 CYSTM1Q9H1C7 97 aa1.7□□□□□ -2.14
GTF3C3-208ENST00000455546 MT1GP13640 62 aa1.69□□□□□ -2.14
GTF3C3-208ENST00000455546 MT4P47944 62 aa1.69□□□□□ -2.14
GTF3C3-208ENST00000455546 V9GYY9 64 aa1.69□□□□□ -2.14
GTF3C3-208ENST00000455546 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
GTF3C3-208ENST00000455546 PP632Q6XCG6 107 aa1.68□□□□□ -2.14
GTF3C3-208ENST00000455546 COA5Q86WW8 74 aa1.68□□□□□ -2.14
GTF3C3-208ENST00000455546 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
GTF3C3-208ENST00000455546 KRTAP4-3Q9BYR4 195 aa1.67□□□□□ -2.14
GTF3C3-208ENST00000455546 SERP1Q9Y6X1 66 aa1.67□□□□□ -2.14
GTF3C3-208ENST00000455546 A0A1B0GU33 70 aa1.66□□□□□ -2.14
GTF3C3-208ENST00000455546 K7ERU9 68 aa1.66□□□□□ -2.14
GTF3C3-208ENST00000455546 KRTAP12-1P59990 96 aa1.66□□□□□ -2.14
GTF3C3-208ENST00000455546 MT1MQ8N339 61 aa1.66□□□□□ -2.14
GTF3C3-208ENST00000455546 SERP2Q8N6R1 65 aa1.66□□□□□ -2.14
GTF3C3-208ENST00000455546 MT1LQ93083 61 aa1.66□□□□□ -2.14
GTF3C3-208ENST00000455546 OBSCNQ5VST9 7968 aa1.65□□□□□ -2.15
GTF3C3-208ENST00000455546 PRO0628Q9UI54 55 aa1.64□□□□□ -2.15
GTF3C3-208ENST00000455546 C10orf95Q9H7T3 257 aa1.63□□□□□ -2.15
GTF3C3-208ENST00000455546 KRTAP5-4Q6L8H1 288 aa1.62□□□□□ -2.15
GTF3C3-208ENST00000455546 KRTAP5-5Q701N2 237 aaPredicted RBP1.62□□□□□ -2.15
GTF3C3-208ENST00000455546 A0A1B0GU69 56 aa1.59□□□□□ -2.15
GTF3C3-208ENST00000455546 H7BZZ5 65 aa1.59□□□□□ -2.15
GTF3C3-208ENST00000455546 TNP1P09430 55 aa1.59□□□□□ -2.15
GTF3C3-208ENST00000455546 COX7CP15954 63 aa1.59□□□□□ -2.15
GTF3C3-208ENST00000455546 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
GTF3C3-208ENST00000455546 ANAPC13Q9BS18 74 aa1.59□□□□□ -2.15
GTF3C3-208ENST00000455546 KRTAP12-3P60328 96 aa1.56□□□□□ -2.16
GTF3C3-208ENST00000455546 KRTAP25-1Q3LHN0 102 aa1.56□□□□□ -2.16
GTF3C3-208ENST00000455546 A6NED7 52 aa1.55□□□□□ -2.16
GTF3C3-208ENST00000455546 HMCN1Q96RW7 5635 aa1.54□□□□□ -2.16
GTF3C3-208ENST00000455546 K7ERS5 55 aa1.54□□□□□ -2.16
GTF3C3-208ENST00000455546 KRTAP20-2Q3LI61 65 aa1.53□□□□□ -2.16
GTF3C3-208ENST00000455546 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
GTF3C3-208ENST00000455546 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.17
GTF3C3-208ENST00000455546 CCDC179H3BU77 68 aa1.5□□□□□ -2.17
GTF3C3-208ENST00000455546 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
GTF3C3-208ENST00000455546 PRR15LQ9BU68 103 aa1.49□□□□□ -2.17
GTF3C3-208ENST00000455546 LINC01558Q9Y6Z2 57 aa1.49□□□□□ -2.17
GTF3C3-208ENST00000455546 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
GTF3C3-208ENST00000455546 LCE1BQ5T7P3 118 aa1.48□□□□□ -2.17
GTF3C3-208ENST00000455546 SYNE1Q8NF91 8797 aaKnown RBP1.48□□□□□ -2.17
GTF3C3-208ENST00000455546 UQCR11O14957 56 aa1.46□□□□□ -2.18
GTF3C3-208ENST00000455546 ATP5EP56381 51 aaPredicted RBP1.43□□□□□ -2.18
GTF3C3-208ENST00000455546 MIR22HGQ0VDD5 57 aa1.43□□□□□ -2.18
GTF3C3-208ENST00000455546 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
GTF3C3-208ENST00000455546 MT1AP04731 61 aa1.4□□□□□ -2.19
GTF3C3-208ENST00000455546 KRTAP5-2Q701N4 177 aa1.39□□□□□ -2.19
GTF3C3-208ENST00000455546 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
GTF3C3-208ENST00000455546 TMEM258P61165 79 aa1.38□□□□□ -2.19
GTF3C3-208ENST00000455546 KRTAP6-2Q3LI66 62 aa1.37□□□□□ -2.19
GTF3C3-208ENST00000455546 Q1T7F1 81 aa1.34□□□□□ -2.19
GTF3C3-208ENST00000455546 CDC42SE1Q9NRR8 79 aa1.32□□□□□ -2.2
GTF3C3-208ENST00000455546 RPS28P62857 69 aaKnown RBP1.31□□□□□ -2.2
GTF3C3-208ENST00000455546 ROMO1P60602 79 aa1.3□□□□□ -2.2
GTF3C3-208ENST00000455546 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
GTF3C3-208ENST00000455546 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
GTF3C3-208ENST00000455546 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
GTF3C3-208ENST00000455546 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
GTF3C3-208ENST00000455546 KTN1-AS1Q86SY8 53 aa1.13□□□□□ -2.23
GTF3C3-208ENST00000455546 PMAIP1Q13794 54 aa1.1□□□□□ -2.23
GTF3C3-208ENST00000455546 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
GTF3C3-208ENST00000455546 BRK1Q8WUW1 75 aa1.04□□□□□ -2.24
GTF3C3-208ENST00000455546 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
GTF3C3-208ENST00000455546 INE1O15225 51 aa0.75□□□□□ -2.29
GTF3C3-208ENST00000455546 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
GTF3C3-208ENST00000455546 PRM1P04553 51 aa0.68□□□□□ -2.3
GTF3C3-208ENST00000455546 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 87.6 ms