RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 KRTAP12-4P60329 112 aa1.22□□□□□ -2.21
RBM39-220ENST00000455343 SPCS1Q9Y6A9 102 aa1.22□□□□□ -2.21
RBM39-220ENST00000455343 V9GYY9 64 aa1.22□□□□□ -2.21
RBM39-220ENST00000455343 LOC105371267A0A1B0GV96 52 aa1.21□□□□□ -2.22
RBM39-220ENST00000455343 M0R143 59 aa1.21□□□□□ -2.22
RBM39-220ENST00000455343 ATOX1O00244 68 aa1.21□□□□□ -2.22
RBM39-220ENST00000455343 H0Y9P7 68 aa1.2□□□□□ -2.22
RBM39-220ENST00000455343 UQCRQO14949 82 aa1.2□□□□□ -2.22
RBM39-220ENST00000455343 CAMK2N1Q7Z7J9 78 aa1.2□□□□□ -2.22
RBM39-220ENST00000455343 TAX1BP3O14907 124 aa1.19□□□□□ -2.22
RBM39-220ENST00000455343 DMAC1Q96GE9 116 aa1.19□□□□□ -2.22
RBM39-220ENST00000455343 KRTAP13-4Q3LI77 160 aa1.18□□□□□ -2.22
RBM39-220ENST00000455343 LINC00208Q96KT6 92 aa1.18□□□□□ -2.22
RBM39-220ENST00000455343 C10orf95Q9H7T3 257 aa1.17□□□□□ -2.22
RBM39-220ENST00000455343 KRTAP12-3P60328 96 aa1.16□□□□□ -2.22
RBM39-220ENST00000455343 TRAV7A0A075B6U4 112 aa1.15□□□□□ -2.23
RBM39-220ENST00000455343 SMIM26A0A096LP01 95 aa1.15□□□□□ -2.23
RBM39-220ENST00000455343 FAM240AA0A1B0GVK7 77 aa1.14□□□□□ -2.23
RBM39-220ENST00000455343 MP68P56378 58 aa1.13□□□□□ -2.23
RBM39-220ENST00000455343 H3BPC8 53 aa1.11□□□□□ -2.23
RBM39-220ENST00000455343 HIST1H4AP62805 103 aaKnown RBP1.11□□□□□ -2.23
RBM39-220ENST00000455343 ATP5EP2Q5VTU8 51 aa1.11□□□□□ -2.23
RBM39-220ENST00000455343 SMIM20Q8N5G0 67 aa1.11□□□□□ -2.23
RBM39-220ENST00000455343 SPTSSBQ8NFR3 76 aa1.11□□□□□ -2.23
RBM39-220ENST00000455343 ACYP2P14621 99 aa1.1□□□□□ -2.23
RBM39-220ENST00000455343 KRTAP12-1P59990 96 aa1.09□□□□□ -2.23
RBM39-220ENST00000455343 KRTAP6-1Q3LI64 71 aa1.09□□□□□ -2.23
RBM39-220ENST00000455343 ETDBQ3ZM63 59 aa1.09□□□□□ -2.23
RBM39-220ENST00000455343 MT1AP04731 61 aa1.08□□□□□ -2.24
RBM39-220ENST00000455343 SPINT4Q6UDR6 99 aa1.08□□□□□ -2.24
RBM39-220ENST00000455343 F8W1H4 67 aa1.07□□□□□ -2.24
RBM39-220ENST00000455343 TNP1P09430 55 aa1.07□□□□□ -2.24
RBM39-220ENST00000455343 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
RBM39-220ENST00000455343 SPATA8Q6RVD6 105 aa1.06□□□□□ -2.24
RBM39-220ENST00000455343 PRO0628Q9UI54 55 aa1.06□□□□□ -2.24
RBM39-220ENST00000455343 A0A1B0GV90 55 aa1.05□□□□□ -2.24
RBM39-220ENST00000455343 CHKB-CPT1BH3BT56 60 aa1.05□□□□□ -2.24
RBM39-220ENST00000455343 SMIM6P0DI80 62 aa1.05□□□□□ -2.24
RBM39-220ENST00000455343 PMAIP1Q13794 54 aa1.05□□□□□ -2.24
RBM39-220ENST00000455343 LINC00643Q86TS7 51 aa1.04□□□□□ -2.24
RBM39-220ENST00000455343 PSPHP1O15172 72 aa1.03□□□□□ -2.24
RBM39-220ENST00000455343 ANAPC13Q9BS18 74 aa1.03□□□□□ -2.24
RBM39-220ENST00000455343 COL5A1-AS1Q5SY13 56 aa1.02□□□□□ -2.25
RBM39-220ENST00000455343 GTF2H5Q6ZYL4 71 aa1.02□□□□□ -2.25
RBM39-220ENST00000455343 A0A1B0GU33 70 aa1.01□□□□□ -2.25
RBM39-220ENST00000455343 LUZP6Q538Z0 58 aa1.01□□□□□ -2.25
RBM39-220ENST00000455343 SCGB1A1P11684 91 aa0.99□□□□□ -2.25
RBM39-220ENST00000455343 SERP1Q9Y6X1 66 aa0.99□□□□□ -2.25
RBM39-220ENST00000455343 A6NED7 52 aa0.98□□□□□ -2.25
RBM39-220ENST00000455343 KRTAP25-1Q3LHN0 102 aa0.98□□□□□ -2.25
RBM39-220ENST00000455343 SPANXA2-OT1Q8N9U9 137 aa0.98□□□□□ -2.25
RBM39-220ENST00000455343 KTN1-AS1Q86SY8 53 aa0.94□□□□□ -2.26
RBM39-220ENST00000455343 COA5Q86WW8 74 aa0.94□□□□□ -2.26
RBM39-220ENST00000455343 K7ERS5 55 aa0.93□□□□□ -2.26
RBM39-220ENST00000455343 BRK1Q8WUW1 75 aa0.93□□□□□ -2.26
RBM39-220ENST00000455343 SNURFQ9Y675 71 aa0.93□□□□□ -2.26
RBM39-220ENST00000455343 CCDC179H3BU77 68 aa0.91□□□□□ -2.26
RBM39-220ENST00000455343 K7ERU9 68 aa0.9□□□□□ -2.27
RBM39-220ENST00000455343 RPS28P62857 69 aaKnown RBP0.9□□□□□ -2.27
RBM39-220ENST00000455343 SERP2Q8N6R1 65 aa0.9□□□□□ -2.27
RBM39-220ENST00000455343 A0A1B0GU69 56 aa0.89□□□□□ -2.27
RBM39-220ENST00000455343 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
RBM39-220ENST00000455343 H7BZZ5 65 aa0.85□□□□□ -2.27
RBM39-220ENST00000455343 J3QR89 54 aa0.85□□□□□ -2.27
RBM39-220ENST00000455343 ROMO1P60602 79 aa0.84□□□□□ -2.27
RBM39-220ENST00000455343 PRR15LQ9BU68 103 aa0.82□□□□□ -2.28
RBM39-220ENST00000455343 TMEM258P61165 79 aa0.8□□□□□ -2.28
RBM39-220ENST00000455343 MIR22HGQ0VDD5 57 aa0.79□□□□□ -2.28
RBM39-220ENST00000455343 UQCR11O14957 56 aa0.78□□□□□ -2.28
RBM39-220ENST00000455343 LINC01558Q9Y6Z2 57 aa0.78□□□□□ -2.28
RBM39-220ENST00000455343 COX7CP15954 63 aa0.76□□□□□ -2.29
RBM39-220ENST00000455343 Q1T7F1 81 aa0.75□□□□□ -2.29
RBM39-220ENST00000455343 CDC42SE1Q9NRR8 79 aa0.73□□□□□ -2.29
RBM39-220ENST00000455343 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
RBM39-220ENST00000455343 ATP5EP56381 51 aaPredicted RBP0.67□□□□□ -2.3
RBM39-220ENST00000455343 INE1O15225 51 aa0.65□□□□□ -2.31
RBM39-220ENST00000455343 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
RBM39-220ENST00000455343 PRM1P04553 51 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 64.6 ms