RNA–Protein interactions for RNA: ENST00000454786.5

UBE2F-218, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 1,292 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-218ENST00000454786 TNP1P09430 55 aa5.83□□□□□ -1.48
UBE2F-218ENST00000454786 SMIM26A0A096LP01 95 aa5.81□□□□□ -1.48
UBE2F-218ENST00000454786 A8MU10 97 aa5.75□□□□□ -1.49
UBE2F-218ENST00000454786 KRTAP20-2Q3LI61 65 aa5.75□□□□□ -1.49
UBE2F-218ENST00000454786 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
UBE2F-218ENST00000454786 A0A1B0GU69 56 aa5.71□□□□□ -1.5
UBE2F-218ENST00000454786 PCP4P48539 62 aa5.7□□□□□ -1.5
UBE2F-218ENST00000454786 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
UBE2F-218ENST00000454786 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
UBE2F-218ENST00000454786 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
UBE2F-218ENST00000454786 KRTAP12-4P60329 112 aa5.62□□□□□ -1.51
UBE2F-218ENST00000454786 H7BZZ5 65 aa5.61□□□□□ -1.51
UBE2F-218ENST00000454786 COX7CP15954 63 aa5.6□□□□□ -1.51
UBE2F-218ENST00000454786 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
UBE2F-218ENST00000454786 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
UBE2F-218ENST00000454786 PRR15LQ9BU68 103 aa5.45□□□□□ -1.54
UBE2F-218ENST00000454786 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
UBE2F-218ENST00000454786 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
UBE2F-218ENST00000454786 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
UBE2F-218ENST00000454786 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
UBE2F-218ENST00000454786 AHNAKQ09666 5890 aaKnown RBP5.26□□□□□ -1.57
UBE2F-218ENST00000454786 UQCR11O14957 56 aa5.25□□□□□ -1.57
UBE2F-218ENST00000454786 KRTAP5-2Q701N4 177 aa5.25□□□□□ -1.57
UBE2F-218ENST00000454786 MUC5ACP98088 5654 aa5.21□□□□□ -1.57
UBE2F-218ENST00000454786 ATP5EP56381 51 aaPredicted RBP5.21□□□□□ -1.58
UBE2F-218ENST00000454786 MUC5BQ9HC84 5762 aaPredicted RBP5.21□□□□□ -1.58
UBE2F-218ENST00000454786 ANAPC13Q9BS18 74 aa5.2□□□□□ -1.58
UBE2F-218ENST00000454786 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
UBE2F-218ENST00000454786 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
UBE2F-218ENST00000454786 MT1AP04731 61 aa5.18□□□□□ -1.58
UBE2F-218ENST00000454786 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
UBE2F-218ENST00000454786 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
UBE2F-218ENST00000454786 CCDC179H3BU77 68 aa5.1□□□□□ -1.59
UBE2F-218ENST00000454786 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
UBE2F-218ENST00000454786 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
UBE2F-218ENST00000454786 K7ERS5 55 aa5.09□□□□□ -1.59
UBE2F-218ENST00000454786 MIR22HGQ0VDD5 57 aa5.08□□□□□ -1.6
UBE2F-218ENST00000454786 KRTAP9-4Q9BYQ2 154 aa5.02□□□□□ -1.61
UBE2F-218ENST00000454786 KRTAP6-2Q3LI66 62 aa5□□□□□ -1.61
UBE2F-218ENST00000454786 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
UBE2F-218ENST00000454786 TMEM258P61165 79 aa4.92□□□□□ -1.62
UBE2F-218ENST00000454786 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
UBE2F-218ENST00000454786 H3BS24 57 aa4.86□□□□□ -1.63
UBE2F-218ENST00000454786 V9GYY9 64 aa4.83□□□□□ -1.64
UBE2F-218ENST00000454786 PSPHP1O15172 72 aa4.78□□□□□ -1.64
UBE2F-218ENST00000454786 RPS28P62857 69 aaKnown RBP4.77□□□□□ -1.65
UBE2F-218ENST00000454786 KRTAP5-1Q6L8H4 278 aa4.76□□□□□ -1.65
UBE2F-218ENST00000454786 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
UBE2F-218ENST00000454786 MT3P25713 68 aa4.75□□□□□ -1.65
UBE2F-218ENST00000454786 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
UBE2F-218ENST00000454786 Q1T7F1 81 aa4.71□□□□□ -1.66
UBE2F-218ENST00000454786 ROMO1P60602 79 aa4.64□□□□□ -1.67
UBE2F-218ENST00000454786 KRTAP4-12Q9BQ66 201 aa4.63□□□□□ -1.67
UBE2F-218ENST00000454786 A6NED7 52 aa4.61□□□□□ -1.67
UBE2F-218ENST00000454786 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
UBE2F-218ENST00000454786 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
UBE2F-218ENST00000454786 BRK1Q8WUW1 75 aa4.34□□□□□ -1.71
UBE2F-218ENST00000454786 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
UBE2F-218ENST00000454786 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
UBE2F-218ENST00000454786 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
UBE2F-218ENST00000454786 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
UBE2F-218ENST00000454786 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
UBE2F-218ENST00000454786 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
UBE2F-218ENST00000454786 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
UBE2F-218ENST00000454786 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
UBE2F-218ENST00000454786 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
UBE2F-218ENST00000454786 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
UBE2F-218ENST00000454786 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
UBE2F-218ENST00000454786 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
UBE2F-218ENST00000454786 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
UBE2F-218ENST00000454786 KRTAP21-2Q3LI59 83 aa3.4□□□□□ -1.87
UBE2F-218ENST00000454786 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
UBE2F-218ENST00000454786 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
UBE2F-218ENST00000454786 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
UBE2F-218ENST00000454786 INE1O15225 51 aa2.99□□□□□ -1.93
UBE2F-218ENST00000454786 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
UBE2F-218ENST00000454786 PRM1P04553 51 aa2.35□□□□□ -2.03
UBE2F-218ENST00000454786 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 69.2 ms