RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
ECHDC1-209ENST00000454591 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
ECHDC1-209ENST00000454591 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-209ENST00000454591 FSIP2Q5CZC0 6907 aa4.79□□□□□ -1.64
ECHDC1-209ENST00000454591 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
ECHDC1-209ENST00000454591 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.72□□□□□ -1.65
ECHDC1-209ENST00000454591 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
ECHDC1-209ENST00000454591 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
ECHDC1-209ENST00000454591 INE1O15225 51 aa4.51□□□□□ -1.69
ECHDC1-209ENST00000454591 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
ECHDC1-209ENST00000454591 USH2AO75445 5202 aa4.44□□□□□ -1.7
ECHDC1-209ENST00000454591 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
ECHDC1-209ENST00000454591 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
ECHDC1-209ENST00000454591 MT1EP04732 61 aa4.39□□□□□ -1.71
ECHDC1-209ENST00000454591 MT1LQ93083 61 aa4.38□□□□□ -1.71
ECHDC1-209ENST00000454591 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
ECHDC1-209ENST00000454591 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.71
ECHDC1-209ENST00000454591 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
ECHDC1-209ENST00000454591 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
ECHDC1-209ENST00000454591 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
ECHDC1-209ENST00000454591 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
ECHDC1-209ENST00000454591 KMT2DO14686 5537 aa4.24□□□□□ -1.73
ECHDC1-209ENST00000454591 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-209ENST00000454591 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-209ENST00000454591 MT1GP13640 62 aa4.13□□□□□ -1.75
ECHDC1-209ENST00000454591 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
ECHDC1-209ENST00000454591 MT1MQ8N339 61 aa4.11□□□□□ -1.75
ECHDC1-209ENST00000454591 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
ECHDC1-209ENST00000454591 KRTAP6-3Q3LI67 103 aa4.08□□□□□ -1.76
ECHDC1-209ENST00000454591 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
ECHDC1-209ENST00000454591 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
ECHDC1-209ENST00000454591 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
ECHDC1-209ENST00000454591 NEBP20929 6669 aa3.99□□□□□ -1.77
ECHDC1-209ENST00000454591 MUC12Q9UKN1 5478 aa3.96□□□□□ -1.77
ECHDC1-209ENST00000454591 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
ECHDC1-209ENST00000454591 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
ECHDC1-209ENST00000454591 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
ECHDC1-209ENST00000454591 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
ECHDC1-209ENST00000454591 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
ECHDC1-209ENST00000454591 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.8
ECHDC1-209ENST00000454591 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
ECHDC1-209ENST00000454591 MT1AP04731 61 aa3.74□□□□□ -1.81
ECHDC1-209ENST00000454591 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
ECHDC1-209ENST00000454591 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-209ENST00000454591 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
ECHDC1-209ENST00000454591 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
ECHDC1-209ENST00000454591 SPRR2EP22531 72 aa3.57□□□□□ -1.84
ECHDC1-209ENST00000454591 SPRR2BP35325 72 aa3.57□□□□□ -1.84
ECHDC1-209ENST00000454591 SPRR2AP35326 72 aa3.57□□□□□ -1.84
ECHDC1-209ENST00000454591 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
ECHDC1-209ENST00000454591 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
ECHDC1-209ENST00000454591 SPRR2DP22532 72 aa3.45□□□□□ -1.86
ECHDC1-209ENST00000454591 MT3P25713 68 aa3.44□□□□□ -1.86
ECHDC1-209ENST00000454591 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-209ENST00000454591 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
ECHDC1-209ENST00000454591 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-209ENST00000454591 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
ECHDC1-209ENST00000454591 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
ECHDC1-209ENST00000454591 PRM1P04553 51 aa3.23□□□□□ -1.89
ECHDC1-209ENST00000454591 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
ECHDC1-209ENST00000454591 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
ECHDC1-209ENST00000454591 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
ECHDC1-209ENST00000454591 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
ECHDC1-209ENST00000454591 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
ECHDC1-209ENST00000454591 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
ECHDC1-209ENST00000454591 MT4P47944 62 aa3.01□□□□□ -1.93
ECHDC1-209ENST00000454591 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
ECHDC1-209ENST00000454591 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.95
ECHDC1-209ENST00000454591 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-209ENST00000454591 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
ECHDC1-209ENST00000454591 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
ECHDC1-209ENST00000454591 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
ECHDC1-209ENST00000454591 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
ECHDC1-209ENST00000454591 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
ECHDC1-209ENST00000454591 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
ECHDC1-209ENST00000454591 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
ECHDC1-209ENST00000454591 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms