RNA–Protein interactions for RNA: ENST00000453861.6

NUP214-204, Transcript of nucleoporin 214, humanhuman

TSL 5

Gene NUP214, Length 3,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-204ENST00000453861 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
NUP214-204ENST00000453861 MT1LQ93083 61 aa3.4□□□□□ -1.87
NUP214-204ENST00000453861 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
NUP214-204ENST00000453861 MT1EP04732 61 aa3.38□□□□□ -1.87
NUP214-204ENST00000453861 CRCT1Q9UGL9 99 aa3.37□□□□□ -1.87
NUP214-204ENST00000453861 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
NUP214-204ENST00000453861 MACF1Q9UPN3 7388 aaKnown RBP3.32□□□□□ -1.88
NUP214-204ENST00000453861 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
NUP214-204ENST00000453861 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
NUP214-204ENST00000453861 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
NUP214-204ENST00000453861 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
NUP214-204ENST00000453861 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
NUP214-204ENST00000453861 MT1GP13640 62 aa3.25□□□□□ -1.89
NUP214-204ENST00000453861 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
NUP214-204ENST00000453861 SPRR2FQ96RM1 72 aa3.19□□□□□ -1.9
NUP214-204ENST00000453861 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
NUP214-204ENST00000453861 MT1MQ8N339 61 aa3.15□□□□□ -1.9
NUP214-204ENST00000453861 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
NUP214-204ENST00000453861 LCE3BQ5TA77 95 aa3.07□□□□□ -1.92
NUP214-204ENST00000453861 KRTAP9-2Q9BYQ4 174 aa3.06□□□□□ -1.92
NUP214-204ENST00000453861 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
NUP214-204ENST00000453861 LCE5AQ5TCM9 118 aa3.02□□□□□ -1.93
NUP214-204ENST00000453861 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
NUP214-204ENST00000453861 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
NUP214-204ENST00000453861 KRTAP9-6A0A140TA67 174 aa2.91□□□□□ -1.94
NUP214-204ENST00000453861 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
NUP214-204ENST00000453861 KRTAP9-7A8MTY7 169 aa2.88□□□□□ -1.95
NUP214-204ENST00000453861 MT1AP04731 61 aa2.88□□□□□ -1.95
NUP214-204ENST00000453861 SPRR2EP22531 72 aa2.88□□□□□ -1.95
NUP214-204ENST00000453861 SPRR2BP35325 72 aa2.88□□□□□ -1.95
NUP214-204ENST00000453861 SPRR2AP35326 72 aa2.88□□□□□ -1.95
NUP214-204ENST00000453861 LCE1FQ5T754 118 aa2.85□□□□□ -1.95
NUP214-204ENST00000453861 LCE1AQ5T7P2 110 aa2.85□□□□□ -1.95
NUP214-204ENST00000453861 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
NUP214-204ENST00000453861 PRM1P04553 51 aa2.84□□□□□ -1.95
NUP214-204ENST00000453861 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
NUP214-204ENST00000453861 KRTAP9-4Q9BYQ2 154 aa2.81□□□□□ -1.96
NUP214-204ENST00000453861 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
NUP214-204ENST00000453861 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
NUP214-204ENST00000453861 SPRR2DP22532 72 aa2.74□□□□□ -1.97
NUP214-204ENST00000453861 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
NUP214-204ENST00000453861 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
NUP214-204ENST00000453861 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
NUP214-204ENST00000453861 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
NUP214-204ENST00000453861 KRTAP4-6Q9BYQ5 205 aa2.64□□□□□ -1.99
NUP214-204ENST00000453861 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
NUP214-204ENST00000453861 LCE4AQ5TA78 99 aa2.56□□□□□ -2
NUP214-204ENST00000453861 NEBP20929 6669 aa2.55□□□□□ -2
NUP214-204ENST00000453861 MT4P47944 62 aa2.55□□□□□ -2
NUP214-204ENST00000453861 MT3P25713 68 aa2.53□□□□□ -2
NUP214-204ENST00000453861 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
NUP214-204ENST00000453861 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
NUP214-204ENST00000453861 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
NUP214-204ENST00000453861 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
NUP214-204ENST00000453861 KRTAP20-1Q3LI63 56 aa2.25□□□□□ -2.05
NUP214-204ENST00000453861 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
NUP214-204ENST00000453861 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
NUP214-204ENST00000453861 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
NUP214-204ENST00000453861 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
NUP214-204ENST00000453861 KRTAP4-11Q9BYQ6 195 aa2.15□□□□□ -2.07
NUP214-204ENST00000453861 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
NUP214-204ENST00000453861 GPR98Q8WXG9 6306 aa2.05□□□□□ -2.08
NUP214-204ENST00000453861 KRTAP5-1Q6L8H4 278 aa1.98□□□□□ -2.09
NUP214-204ENST00000453861 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
NUP214-204ENST00000453861 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
NUP214-204ENST00000453861 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
NUP214-204ENST00000453861 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
NUP214-204ENST00000453861 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
NUP214-204ENST00000453861 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
NUP214-204ENST00000453861 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
NUP214-204ENST00000453861 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
NUP214-204ENST00000453861 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
NUP214-204ENST00000453861 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
NUP214-204ENST00000453861 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
NUP214-204ENST00000453861 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.15
NUP214-204ENST00000453861 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
NUP214-204ENST00000453861 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
NUP214-204ENST00000453861 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 77 ms