RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 MT1MQ8N339 61 aa5.17□□□□□ -1.58
HSPG2-207ENST00000453796 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
HSPG2-207ENST00000453796 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
HSPG2-207ENST00000453796 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
HSPG2-207ENST00000453796 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
HSPG2-207ENST00000453796 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
HSPG2-207ENST00000453796 Q1T7F1 81 aa4.98□□□□□ -1.61
HSPG2-207ENST00000453796 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
HSPG2-207ENST00000453796 V9GYY9 64 aa4.98□□□□□ -1.61
HSPG2-207ENST00000453796 PSPHP1O15172 72 aa4.96□□□□□ -1.62
HSPG2-207ENST00000453796 KRTAP25-1Q3LHN0 102 aa4.96□□□□□ -1.62
HSPG2-207ENST00000453796 KRTAP5-4Q6L8H1 288 aa4.94□□□□□ -1.62
HSPG2-207ENST00000453796 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
HSPG2-207ENST00000453796 K7ERS5 55 aa4.91□□□□□ -1.62
HSPG2-207ENST00000453796 MT4P47944 62 aa4.9□□□□□ -1.63
HSPG2-207ENST00000453796 HMCN1Q96RW7 5635 aa4.84□□□□□ -1.64
HSPG2-207ENST00000453796 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
HSPG2-207ENST00000453796 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
HSPG2-207ENST00000453796 A6NED7 52 aa4.78□□□□□ -1.64
HSPG2-207ENST00000453796 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
HSPG2-207ENST00000453796 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
HSPG2-207ENST00000453796 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
HSPG2-207ENST00000453796 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
HSPG2-207ENST00000453796 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
HSPG2-207ENST00000453796 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
HSPG2-207ENST00000453796 CDC42SE1Q9NRR8 79 aa4.68□□□□□ -1.66
HSPG2-207ENST00000453796 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
HSPG2-207ENST00000453796 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
HSPG2-207ENST00000453796 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
HSPG2-207ENST00000453796 KRTAP5-10Q6L8G5 202 aa4.63□□□□□ -1.67
HSPG2-207ENST00000453796 ROMO1P60602 79 aa4.62□□□□□ -1.67
HSPG2-207ENST00000453796 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
HSPG2-207ENST00000453796 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
HSPG2-207ENST00000453796 SYNE1Q8NF91 8797 aaKnown RBP4.53□□□□□ -1.68
HSPG2-207ENST00000453796 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
HSPG2-207ENST00000453796 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
HSPG2-207ENST00000453796 MT1AP04731 61 aa4.42□□□□□ -1.7
HSPG2-207ENST00000453796 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
HSPG2-207ENST00000453796 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.71
HSPG2-207ENST00000453796 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
HSPG2-207ENST00000453796 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
HSPG2-207ENST00000453796 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
HSPG2-207ENST00000453796 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
HSPG2-207ENST00000453796 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
HSPG2-207ENST00000453796 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
HSPG2-207ENST00000453796 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
HSPG2-207ENST00000453796 KRTAP5-8O75690 187 aa4.09□□□□□ -1.75
HSPG2-207ENST00000453796 OBSCNQ5VST9 7968 aa4.05□□□□□ -1.76
HSPG2-207ENST00000453796 MT3P25713 68 aa4.02□□□□□ -1.77
HSPG2-207ENST00000453796 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
HSPG2-207ENST00000453796 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
HSPG2-207ENST00000453796 H3BS24 57 aa3.85□□□□□ -1.79
HSPG2-207ENST00000453796 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
HSPG2-207ENST00000453796 MUC5BQ9HC84 5762 aaPredicted RBP3.79□□□□□ -1.8
HSPG2-207ENST00000453796 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
HSPG2-207ENST00000453796 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
HSPG2-207ENST00000453796 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
HSPG2-207ENST00000453796 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
HSPG2-207ENST00000453796 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
HSPG2-207ENST00000453796 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
HSPG2-207ENST00000453796 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
HSPG2-207ENST00000453796 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
HSPG2-207ENST00000453796 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
HSPG2-207ENST00000453796 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
HSPG2-207ENST00000453796 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
HSPG2-207ENST00000453796 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
HSPG2-207ENST00000453796 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
HSPG2-207ENST00000453796 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
HSPG2-207ENST00000453796 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
HSPG2-207ENST00000453796 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
HSPG2-207ENST00000453796 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
HSPG2-207ENST00000453796 INE1O15225 51 aa2.72□□□□□ -1.97
HSPG2-207ENST00000453796 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
HSPG2-207ENST00000453796 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
HSPG2-207ENST00000453796 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
HSPG2-207ENST00000453796 PRM1P04553 51 aa2.37□□□□□ -2.03
HSPG2-207ENST00000453796 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
HSPG2-207ENST00000453796 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 88.3 ms