RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 LCE4AQ5TA78 99 aa5.92□□□□□ -1.46
RBM39-219ENST00000453310 SPRR2EP22531 72 aa5.91□□□□□ -1.46
RBM39-219ENST00000453310 SPRR2BP35325 72 aa5.91□□□□□ -1.46
RBM39-219ENST00000453310 SPRR2AP35326 72 aa5.91□□□□□ -1.46
RBM39-219ENST00000453310 KRTAP4-11Q9BYQ6 195 aa5.91□□□□□ -1.46
RBM39-219ENST00000453310 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
RBM39-219ENST00000453310 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
RBM39-219ENST00000453310 LCE1AQ5T7P2 110 aa5.87□□□□□ -1.47
RBM39-219ENST00000453310 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
RBM39-219ENST00000453310 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
RBM39-219ENST00000453310 KRTAP19-5Q3LI72 72 aa5.81□□□□□ -1.48
RBM39-219ENST00000453310 MT1EP04732 61 aa5.8□□□□□ -1.48
RBM39-219ENST00000453310 ROMO1P60602 79 aa5.74□□□□□ -1.49
RBM39-219ENST00000453310 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
RBM39-219ENST00000453310 SPRR2DP22532 72 aa5.7□□□□□ -1.5
RBM39-219ENST00000453310 BRK1Q8WUW1 75 aa5.69□□□□□ -1.5
RBM39-219ENST00000453310 KRTAP20-1Q3LI63 56 aa5.68□□□□□ -1.5
RBM39-219ENST00000453310 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
RBM39-219ENST00000453310 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
RBM39-219ENST00000453310 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
RBM39-219ENST00000453310 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
RBM39-219ENST00000453310 MT1LQ93083 61 aa5.6□□□□□ -1.51
RBM39-219ENST00000453310 MT1GP13640 62 aa5.58□□□□□ -1.52
RBM39-219ENST00000453310 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
RBM39-219ENST00000453310 MT1MQ8N339 61 aa5.5□□□□□ -1.53
RBM39-219ENST00000453310 KRTAP5-3Q6L8H2 238 aa5.49□□□□□ -1.53
RBM39-219ENST00000453310 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.54
RBM39-219ENST00000453310 KRTAP2-1Q9BYU5 128 aa5.46□□□□□ -1.54
RBM39-219ENST00000453310 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
RBM39-219ENST00000453310 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
RBM39-219ENST00000453310 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
RBM39-219ENST00000453310 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
RBM39-219ENST00000453310 PRO0628Q9UI54 55 aa5.27□□□□□ -1.57
RBM39-219ENST00000453310 LCE3CQ5T5A8 94 aa5.22□□□□□ -1.57
RBM39-219ENST00000453310 PRAC1Q96KF2 57 aa5.1□□□□□ -1.59
RBM39-219ENST00000453310 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
RBM39-219ENST00000453310 KRTAP5-5Q701N2 237 aaPredicted RBP5.01□□□□□ -1.61
RBM39-219ENST00000453310 KTN1-AS1Q86SY8 53 aa4.97□□□□□ -1.61
RBM39-219ENST00000453310 MT4P47944 62 aa4.96□□□□□ -1.62
RBM39-219ENST00000453310 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
RBM39-219ENST00000453310 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
RBM39-219ENST00000453310 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
RBM39-219ENST00000453310 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
RBM39-219ENST00000453310 MT1AP04731 61 aa4.77□□□□□ -1.65
RBM39-219ENST00000453310 SPRR5A0A1B0GTR4 108 aa4.73□□□□□ -1.65
RBM39-219ENST00000453310 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
RBM39-219ENST00000453310 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
RBM39-219ENST00000453310 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
RBM39-219ENST00000453310 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
RBM39-219ENST00000453310 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
RBM39-219ENST00000453310 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
RBM39-219ENST00000453310 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
RBM39-219ENST00000453310 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
RBM39-219ENST00000453310 MT3P25713 68 aa4.34□□□□□ -1.71
RBM39-219ENST00000453310 LUZP6Q538Z0 58 aa4.24□□□□□ -1.73
RBM39-219ENST00000453310 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
RBM39-219ENST00000453310 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
RBM39-219ENST00000453310 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
RBM39-219ENST00000453310 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
RBM39-219ENST00000453310 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
RBM39-219ENST00000453310 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
RBM39-219ENST00000453310 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
RBM39-219ENST00000453310 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
RBM39-219ENST00000453310 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
RBM39-219ENST00000453310 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
RBM39-219ENST00000453310 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
RBM39-219ENST00000453310 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
RBM39-219ENST00000453310 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
RBM39-219ENST00000453310 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
RBM39-219ENST00000453310 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
RBM39-219ENST00000453310 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
RBM39-219ENST00000453310 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
RBM39-219ENST00000453310 INE1O15225 51 aa3.06□□□□□ -1.92
RBM39-219ENST00000453310 PRM1P04553 51 aa2.97□□□□□ -1.93
RBM39-219ENST00000453310 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
RBM39-219ENST00000453310 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
RBM39-219ENST00000453310 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
RBM39-219ENST00000453310 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 159.1 ms