RNA–Protein interactions for RNA: ENST00000450198.6

SMARCA2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCA2, Length 5,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-214ENST00000450198 ABCA13Q86UQ4 5058 aa4.47□□□□□ -1.69
SMARCA2-214ENST00000450198 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.7
SMARCA2-214ENST00000450198 KRTAP9-7A8MTY7 169 aa4.44□□□□□ -1.7
SMARCA2-214ENST00000450198 TNXBP22105 4242 aa4.42□□□□□ -1.7
SMARCA2-214ENST00000450198 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
SMARCA2-214ENST00000450198 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
SMARCA2-214ENST00000450198 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
SMARCA2-214ENST00000450198 MUC17Q685J3 4493 aa4.36□□□□□ -1.71
SMARCA2-214ENST00000450198 PRM1P04553 51 aa4.3□□□□□ -1.72
SMARCA2-214ENST00000450198 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
SMARCA2-214ENST00000450198 MT1AP04731 61 aa4.27□□□□□ -1.73
SMARCA2-214ENST00000450198 LCE2AQ5TA79 106 aaPredicted RBP4.26□□□□□ -1.73
SMARCA2-214ENST00000450198 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
SMARCA2-214ENST00000450198 MUC2Q02817 5179 aa4.23□□□□□ -1.73
SMARCA2-214ENST00000450198 LCE4AQ5TA78 99 aa4.21□□□□□ -1.73
SMARCA2-214ENST00000450198 KRTAP19-2Q3LHN2 52 aa4.2□□□□□ -1.74
SMARCA2-214ENST00000450198 KRTAP2-2Q9BYT5 123 aa4.2□□□□□ -1.74
SMARCA2-214ENST00000450198 KRTAP2-1Q9BYU5 128 aa4.2□□□□□ -1.74
SMARCA2-214ENST00000450198 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
SMARCA2-214ENST00000450198 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
SMARCA2-214ENST00000450198 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
SMARCA2-214ENST00000450198 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
SMARCA2-214ENST00000450198 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
SMARCA2-214ENST00000450198 HMCN2Q8NDA2 5059 aa4.17□□□□□ -1.74
SMARCA2-214ENST00000450198 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
SMARCA2-214ENST00000450198 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
SMARCA2-214ENST00000450198 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
SMARCA2-214ENST00000450198 FAT4Q6V0I7 4981 aa4.09□□□□□ -1.75
SMARCA2-214ENST00000450198 UBR4Q5T4S7 5183 aa4.09□□□□□ -1.76
SMARCA2-214ENST00000450198 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
SMARCA2-214ENST00000450198 RNF213Q63HN8 5207 aa4.08□□□□□ -1.76
SMARCA2-214ENST00000450198 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
SMARCA2-214ENST00000450198 FLGP20930 4061 aaPredicted RBP4.01□□□□□ -1.77
SMARCA2-214ENST00000450198 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
SMARCA2-214ENST00000450198 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
SMARCA2-214ENST00000450198 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
SMARCA2-214ENST00000450198 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
SMARCA2-214ENST00000450198 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
SMARCA2-214ENST00000450198 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
SMARCA2-214ENST00000450198 KMT2DO14686 5537 aa3.7□□□□□ -1.82
SMARCA2-214ENST00000450198 USH2AO75445 5202 aa3.69□□□□□ -1.82
SMARCA2-214ENST00000450198 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
SMARCA2-214ENST00000450198 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
SMARCA2-214ENST00000450198 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
SMARCA2-214ENST00000450198 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
SMARCA2-214ENST00000450198 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
SMARCA2-214ENST00000450198 NEBP20929 6669 aa3.48□□□□□ -1.85
SMARCA2-214ENST00000450198 KRTAP5-9P26371 169 aa3.34□□□□□ -1.88
SMARCA2-214ENST00000450198 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
SMARCA2-214ENST00000450198 MUC12Q9UKN1 5478 aa3.32□□□□□ -1.88
SMARCA2-214ENST00000450198 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
SMARCA2-214ENST00000450198 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
SMARCA2-214ENST00000450198 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
SMARCA2-214ENST00000450198 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
SMARCA2-214ENST00000450198 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
SMARCA2-214ENST00000450198 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
SMARCA2-214ENST00000450198 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
SMARCA2-214ENST00000450198 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
SMARCA2-214ENST00000450198 MDN1Q9NU22 5596 aa3□□□□□ -1.93
SMARCA2-214ENST00000450198 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
SMARCA2-214ENST00000450198 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
SMARCA2-214ENST00000450198 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
SMARCA2-214ENST00000450198 PHGR1C9JFL3 82 aa2.58□□□□□ -2
SMARCA2-214ENST00000450198 MUC5ACP98088 5654 aa2.57□□□□□ -2
SMARCA2-214ENST00000450198 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
SMARCA2-214ENST00000450198 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
SMARCA2-214ENST00000450198 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
SMARCA2-214ENST00000450198 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
SMARCA2-214ENST00000450198 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
SMARCA2-214ENST00000450198 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
SMARCA2-214ENST00000450198 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
SMARCA2-214ENST00000450198 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
SMARCA2-214ENST00000450198 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
SMARCA2-214ENST00000450198 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
SMARCA2-214ENST00000450198 KRTAP21-2Q3LI59 83 aa1.8□□□□□ -2.12
SMARCA2-214ENST00000450198 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
SMARCA2-214ENST00000450198 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 125 ms