RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 A6NED7 52 aa4.52□□□□□ -1.69
MSH5-209ENST00000450148 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
MSH5-209ENST00000450148 A0A1B0GU69 56 aa4.5□□□□□ -1.69
MSH5-209ENST00000450148 MT1GP13640 62 aa4.46□□□□□ -1.7
MSH5-209ENST00000450148 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
MSH5-209ENST00000450148 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
MSH5-209ENST00000450148 MT1MQ8N339 61 aa4.41□□□□□ -1.7
MSH5-209ENST00000450148 MT1LQ93083 61 aa4.41□□□□□ -1.7
MSH5-209ENST00000450148 UQCR11O14957 56 aa4.4□□□□□ -1.71
MSH5-209ENST00000450148 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
MSH5-209ENST00000450148 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
MSH5-209ENST00000450148 PP632Q6XCG6 107 aa4.38□□□□□ -1.71
MSH5-209ENST00000450148 PMAIP1Q13794 54 aa4.37□□□□□ -1.71
MSH5-209ENST00000450148 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
MSH5-209ENST00000450148 LCE1DQ5T752 114 aa4.34□□□□□ -1.71
MSH5-209ENST00000450148 TNP1P09430 55 aa4.32□□□□□ -1.72
MSH5-209ENST00000450148 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
MSH5-209ENST00000450148 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
MSH5-209ENST00000450148 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
MSH5-209ENST00000450148 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
MSH5-209ENST00000450148 MT4P47944 62 aa4.26□□□□□ -1.73
MSH5-209ENST00000450148 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
MSH5-209ENST00000450148 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
MSH5-209ENST00000450148 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
MSH5-209ENST00000450148 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
MSH5-209ENST00000450148 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
MSH5-209ENST00000450148 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.75
MSH5-209ENST00000450148 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
MSH5-209ENST00000450148 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
MSH5-209ENST00000450148 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
MSH5-209ENST00000450148 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
MSH5-209ENST00000450148 K7ERS5 55 aa4.05□□□□□ -1.76
MSH5-209ENST00000450148 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
MSH5-209ENST00000450148 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
MSH5-209ENST00000450148 ROMO1P60602 79 aa4.02□□□□□ -1.77
MSH5-209ENST00000450148 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
MSH5-209ENST00000450148 KRTAP23-1A1A580 65 aa4□□□□□ -1.77
MSH5-209ENST00000450148 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
MSH5-209ENST00000450148 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
MSH5-209ENST00000450148 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
MSH5-209ENST00000450148 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
MSH5-209ENST00000450148 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
MSH5-209ENST00000450148 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
MSH5-209ENST00000450148 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
MSH5-209ENST00000450148 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.79
MSH5-209ENST00000450148 MT1AP04731 61 aa3.75□□□□□ -1.81
MSH5-209ENST00000450148 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
MSH5-209ENST00000450148 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
MSH5-209ENST00000450148 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
MSH5-209ENST00000450148 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
MSH5-209ENST00000450148 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
MSH5-209ENST00000450148 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
MSH5-209ENST00000450148 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
MSH5-209ENST00000450148 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
MSH5-209ENST00000450148 MT3P25713 68 aa3.4□□□□□ -1.87
MSH5-209ENST00000450148 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
MSH5-209ENST00000450148 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
MSH5-209ENST00000450148 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
MSH5-209ENST00000450148 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
MSH5-209ENST00000450148 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
MSH5-209ENST00000450148 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
MSH5-209ENST00000450148 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
MSH5-209ENST00000450148 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
MSH5-209ENST00000450148 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
MSH5-209ENST00000450148 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
MSH5-209ENST00000450148 INE1O15225 51 aa2.77□□□□□ -1.97
MSH5-209ENST00000450148 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
MSH5-209ENST00000450148 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
MSH5-209ENST00000450148 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
MSH5-209ENST00000450148 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
MSH5-209ENST00000450148 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
MSH5-209ENST00000450148 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
MSH5-209ENST00000450148 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
MSH5-209ENST00000450148 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
MSH5-209ENST00000450148 PRM1P04553 51 aa2.13□□□□□ -2.07
MSH5-209ENST00000450148 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
MSH5-209ENST00000450148 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
MSH5-209ENST00000450148 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 103.1 ms