RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 LCE2DQ5TA82 110 aaPredicted RBP4.69□□□□□ -1.66
SYNGAP1-204ENST00000449372 FCGBPQ9Y6R7 5405 aaPredicted RBP4.56□□□□□ -1.68
SYNGAP1-204ENST00000449372 MT1EP04732 61 aa4.56□□□□□ -1.68
SYNGAP1-204ENST00000449372 CRCT1Q9UGL9 99 aa4.56□□□□□ -1.68
SYNGAP1-204ENST00000449372 MT1LQ93083 61 aa4.51□□□□□ -1.69
SYNGAP1-204ENST00000449372 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
SYNGAP1-204ENST00000449372 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
SYNGAP1-204ENST00000449372 SYNE1Q8NF91 8797 aaKnown RBP4.4□□□□□ -1.71
SYNGAP1-204ENST00000449372 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
SYNGAP1-204ENST00000449372 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
SYNGAP1-204ENST00000449372 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
SYNGAP1-204ENST00000449372 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
SYNGAP1-204ENST00000449372 MT1GP13640 62 aa4.27□□□□□ -1.73
SYNGAP1-204ENST00000449372 MT1MQ8N339 61 aa4.27□□□□□ -1.73
SYNGAP1-204ENST00000449372 KRTAP9-7A8MTY7 169 aa4.25□□□□□ -1.73
SYNGAP1-204ENST00000449372 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
SYNGAP1-204ENST00000449372 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
SYNGAP1-204ENST00000449372 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
SYNGAP1-204ENST00000449372 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
SYNGAP1-204ENST00000449372 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
SYNGAP1-204ENST00000449372 KRTAP5-9P26371 169 aa4.15□□□□□ -1.74
SYNGAP1-204ENST00000449372 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
SYNGAP1-204ENST00000449372 MDN1Q9NU22 5596 aa4.09□□□□□ -1.75
SYNGAP1-204ENST00000449372 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
SYNGAP1-204ENST00000449372 LCE1AQ5T7P2 110 aa4.06□□□□□ -1.76
SYNGAP1-204ENST00000449372 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
SYNGAP1-204ENST00000449372 PRM1P04553 51 aa4.04□□□□□ -1.76
SYNGAP1-204ENST00000449372 DSTQ03001 7570 aaKnown RBP4□□□□□ -1.77
SYNGAP1-204ENST00000449372 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
SYNGAP1-204ENST00000449372 MT1AP04731 61 aa3.98□□□□□ -1.77
SYNGAP1-204ENST00000449372 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
SYNGAP1-204ENST00000449372 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
SYNGAP1-204ENST00000449372 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.78
SYNGAP1-204ENST00000449372 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.78
SYNGAP1-204ENST00000449372 SPRR2EP22531 72 aa3.89□□□□□ -1.79
SYNGAP1-204ENST00000449372 SPRR2BP35325 72 aa3.89□□□□□ -1.79
SYNGAP1-204ENST00000449372 SPRR2AP35326 72 aa3.89□□□□□ -1.79
SYNGAP1-204ENST00000449372 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
SYNGAP1-204ENST00000449372 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
SYNGAP1-204ENST00000449372 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
SYNGAP1-204ENST00000449372 SPRR2DP22532 72 aa3.73□□□□□ -1.81
SYNGAP1-204ENST00000449372 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
SYNGAP1-204ENST00000449372 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
SYNGAP1-204ENST00000449372 NEBP20929 6669 aa3.65□□□□□ -1.83
SYNGAP1-204ENST00000449372 KRTAP9-4Q9BYQ2 154 aa3.61□□□□□ -1.83
SYNGAP1-204ENST00000449372 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
SYNGAP1-204ENST00000449372 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
SYNGAP1-204ENST00000449372 MT3P25713 68 aa3.56□□□□□ -1.84
SYNGAP1-204ENST00000449372 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
SYNGAP1-204ENST00000449372 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.87
SYNGAP1-204ENST00000449372 LCE4AQ5TA78 99 aa3.32□□□□□ -1.88
SYNGAP1-204ENST00000449372 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
SYNGAP1-204ENST00000449372 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
SYNGAP1-204ENST00000449372 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
SYNGAP1-204ENST00000449372 MT4P47944 62 aa3.25□□□□□ -1.89
SYNGAP1-204ENST00000449372 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
SYNGAP1-204ENST00000449372 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
SYNGAP1-204ENST00000449372 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
SYNGAP1-204ENST00000449372 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
SYNGAP1-204ENST00000449372 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
SYNGAP1-204ENST00000449372 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
SYNGAP1-204ENST00000449372 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
SYNGAP1-204ENST00000449372 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
SYNGAP1-204ENST00000449372 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
SYNGAP1-204ENST00000449372 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
SYNGAP1-204ENST00000449372 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
SYNGAP1-204ENST00000449372 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
SYNGAP1-204ENST00000449372 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
SYNGAP1-204ENST00000449372 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
SYNGAP1-204ENST00000449372 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
SYNGAP1-204ENST00000449372 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
SYNGAP1-204ENST00000449372 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
SYNGAP1-204ENST00000449372 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
SYNGAP1-204ENST00000449372 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
SYNGAP1-204ENST00000449372 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
SYNGAP1-204ENST00000449372 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
SYNGAP1-204ENST00000449372 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
SYNGAP1-204ENST00000449372 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 15.1 ms