RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 FSIP2Q5CZC0 6907 aa4.6□□□□□ -1.67
POLR1B-209ENST00000448770 KRTAP9-2Q9BYQ4 174 aa4.56□□□□□ -1.68
POLR1B-209ENST00000448770 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
POLR1B-209ENST00000448770 LOC100996750A0A140TA64 210 aa4.54□□□□□ -1.68
POLR1B-209ENST00000448770 FCGBPQ9Y6R7 5405 aaPredicted RBP4.53□□□□□ -1.68
POLR1B-209ENST00000448770 MUC12Q9UKN1 5478 aa4.48□□□□□ -1.69
POLR1B-209ENST00000448770 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
POLR1B-209ENST00000448770 MT1GP13640 62 aa4.44□□□□□ -1.7
POLR1B-209ENST00000448770 CRCT1Q9UGL9 99 aa4.4□□□□□ -1.7
POLR1B-209ENST00000448770 MT1MQ8N339 61 aa4.37□□□□□ -1.71
POLR1B-209ENST00000448770 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
POLR1B-209ENST00000448770 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
POLR1B-209ENST00000448770 KRTAP9-6A0A140TA67 174 aa4.28□□□□□ -1.72
POLR1B-209ENST00000448770 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
POLR1B-209ENST00000448770 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
POLR1B-209ENST00000448770 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
POLR1B-209ENST00000448770 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
POLR1B-209ENST00000448770 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
POLR1B-209ENST00000448770 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
POLR1B-209ENST00000448770 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
POLR1B-209ENST00000448770 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.75
POLR1B-209ENST00000448770 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
POLR1B-209ENST00000448770 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
POLR1B-209ENST00000448770 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
POLR1B-209ENST00000448770 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
POLR1B-209ENST00000448770 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
POLR1B-209ENST00000448770 MDN1Q9NU22 5596 aa4□□□□□ -1.77
POLR1B-209ENST00000448770 SPRR2EP22531 72 aa3.93□□□□□ -1.78
POLR1B-209ENST00000448770 SPRR2BP35325 72 aa3.93□□□□□ -1.78
POLR1B-209ENST00000448770 SPRR2AP35326 72 aa3.93□□□□□ -1.78
POLR1B-209ENST00000448770 MT1AP04731 61 aa3.92□□□□□ -1.78
POLR1B-209ENST00000448770 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
POLR1B-209ENST00000448770 KRTAP9-7A8MTY7 169 aa3.85□□□□□ -1.79
POLR1B-209ENST00000448770 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
POLR1B-209ENST00000448770 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
POLR1B-209ENST00000448770 SPRR2DP22532 72 aa3.78□□□□□ -1.8
POLR1B-209ENST00000448770 PRM1P04553 51 aa3.75□□□□□ -1.81
POLR1B-209ENST00000448770 NEBP20929 6669 aa3.7□□□□□ -1.82
POLR1B-209ENST00000448770 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
POLR1B-209ENST00000448770 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.82
POLR1B-209ENST00000448770 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
POLR1B-209ENST00000448770 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
POLR1B-209ENST00000448770 MT3P25713 68 aa3.46□□□□□ -1.86
POLR1B-209ENST00000448770 KRTAP4-6Q9BYQ5 205 aa3.46□□□□□ -1.86
POLR1B-209ENST00000448770 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
POLR1B-209ENST00000448770 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
POLR1B-209ENST00000448770 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
POLR1B-209ENST00000448770 MT4P47944 62 aa3.27□□□□□ -1.89
POLR1B-209ENST00000448770 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
POLR1B-209ENST00000448770 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
POLR1B-209ENST00000448770 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
POLR1B-209ENST00000448770 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
POLR1B-209ENST00000448770 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
POLR1B-209ENST00000448770 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
POLR1B-209ENST00000448770 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
POLR1B-209ENST00000448770 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
POLR1B-209ENST00000448770 LCE1EQ5T753 118 aa2.84□□□□□ -1.96
POLR1B-209ENST00000448770 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.96
POLR1B-209ENST00000448770 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
POLR1B-209ENST00000448770 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
POLR1B-209ENST00000448770 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
POLR1B-209ENST00000448770 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
POLR1B-209ENST00000448770 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
POLR1B-209ENST00000448770 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
POLR1B-209ENST00000448770 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
POLR1B-209ENST00000448770 LCE1CQ5T751 118 aa2.65□□□□□ -1.98
POLR1B-209ENST00000448770 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
POLR1B-209ENST00000448770 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
POLR1B-209ENST00000448770 LCE1FQ5T754 118 aa2.54□□□□□ -2
POLR1B-209ENST00000448770 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
POLR1B-209ENST00000448770 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
POLR1B-209ENST00000448770 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
POLR1B-209ENST00000448770 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
POLR1B-209ENST00000448770 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
POLR1B-209ENST00000448770 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
POLR1B-209ENST00000448770 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
POLR1B-209ENST00000448770 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
POLR1B-209ENST00000448770 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 199.8 ms