RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
TRA2A-203ENST00000448549 A0A1B0GU33 70 aa5.46□□□□□ -1.54
TRA2A-203ENST00000448549 K7ERU9 68 aa5.46□□□□□ -1.54
TRA2A-203ENST00000448549 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
TRA2A-203ENST00000448549 SERP2Q8N6R1 65 aa5.45□□□□□ -1.54
TRA2A-203ENST00000448549 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
TRA2A-203ENST00000448549 AHNAK2Q8IVF2 5795 aa5.42□□□□□ -1.54
TRA2A-203ENST00000448549 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
TRA2A-203ENST00000448549 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
TRA2A-203ENST00000448549 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
TRA2A-203ENST00000448549 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
TRA2A-203ENST00000448549 SMIM26A0A096LP01 95 aa5.3□□□□□ -1.56
TRA2A-203ENST00000448549 A8MU10 97 aa5.29□□□□□ -1.56
TRA2A-203ENST00000448549 TNP1P09430 55 aa5.29□□□□□ -1.56
TRA2A-203ENST00000448549 A0A1B0GU69 56 aa5.24□□□□□ -1.57
TRA2A-203ENST00000448549 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
TRA2A-203ENST00000448549 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
TRA2A-203ENST00000448549 H7BZZ5 65 aa5.19□□□□□ -1.58
TRA2A-203ENST00000448549 COX7CP15954 63 aa5.19□□□□□ -1.58
TRA2A-203ENST00000448549 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
TRA2A-203ENST00000448549 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.59
TRA2A-203ENST00000448549 KRTAP5-5Q701N2 237 aaPredicted RBP5.1□□□□□ -1.59
TRA2A-203ENST00000448549 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
TRA2A-203ENST00000448549 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
TRA2A-203ENST00000448549 PRR15LQ9BU68 103 aa4.98□□□□□ -1.61
TRA2A-203ENST00000448549 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.63
TRA2A-203ENST00000448549 LINC01558Q9Y6Z2 57 aa4.87□□□□□ -1.63
TRA2A-203ENST00000448549 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
TRA2A-203ENST00000448549 ANAPC13Q9BS18 74 aa4.85□□□□□ -1.63
TRA2A-203ENST00000448549 UQCR11O14957 56 aa4.81□□□□□ -1.64
TRA2A-203ENST00000448549 CCDC179H3BU77 68 aa4.79□□□□□ -1.64
TRA2A-203ENST00000448549 ATP5EP56381 51 aaPredicted RBP4.77□□□□□ -1.65
TRA2A-203ENST00000448549 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
TRA2A-203ENST00000448549 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
TRA2A-203ENST00000448549 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
TRA2A-203ENST00000448549 MT1AP04731 61 aa4.67□□□□□ -1.66
TRA2A-203ENST00000448549 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
TRA2A-203ENST00000448549 K7ERS5 55 aa4.64□□□□□ -1.67
TRA2A-203ENST00000448549 KRTAP5-8O75690 187 aa4.62□□□□□ -1.67
TRA2A-203ENST00000448549 MT3P25713 68 aa4.61□□□□□ -1.67
TRA2A-203ENST00000448549 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
TRA2A-203ENST00000448549 TMEM258P61165 79 aa4.55□□□□□ -1.68
TRA2A-203ENST00000448549 AHNAKQ09666 5890 aaKnown RBP4.54□□□□□ -1.68
TRA2A-203ENST00000448549 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
TRA2A-203ENST00000448549 MUC5BQ9HC84 5762 aaPredicted RBP4.5□□□□□ -1.69
TRA2A-203ENST00000448549 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
TRA2A-203ENST00000448549 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
TRA2A-203ENST00000448549 PSPHP1O15172 72 aa4.46□□□□□ -1.7
TRA2A-203ENST00000448549 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
TRA2A-203ENST00000448549 Q1T7F1 81 aa4.37□□□□□ -1.71
TRA2A-203ENST00000448549 V9GYY9 64 aa4.37□□□□□ -1.71
TRA2A-203ENST00000448549 CDC42SE1Q9NRR8 79 aa4.36□□□□□ -1.71
TRA2A-203ENST00000448549 RPS28P62857 69 aaKnown RBP4.35□□□□□ -1.71
TRA2A-203ENST00000448549 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
TRA2A-203ENST00000448549 ROMO1P60602 79 aa4.28□□□□□ -1.72
TRA2A-203ENST00000448549 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
TRA2A-203ENST00000448549 A6NED7 52 aa4.27□□□□□ -1.73
TRA2A-203ENST00000448549 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
TRA2A-203ENST00000448549 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
TRA2A-203ENST00000448549 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
TRA2A-203ENST00000448549 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
TRA2A-203ENST00000448549 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
TRA2A-203ENST00000448549 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
TRA2A-203ENST00000448549 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
TRA2A-203ENST00000448549 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
TRA2A-203ENST00000448549 BRK1Q8WUW1 75 aa3.31□□□□□ -1.88
TRA2A-203ENST00000448549 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
TRA2A-203ENST00000448549 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
TRA2A-203ENST00000448549 PMAIP1Q13794 54 aa3.09□□□□□ -1.91
TRA2A-203ENST00000448549 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
TRA2A-203ENST00000448549 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
TRA2A-203ENST00000448549 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
TRA2A-203ENST00000448549 PRO0628Q9UI54 55 aa2.52□□□□□ -2.01
TRA2A-203ENST00000448549 KTN1-AS1Q86SY8 53 aa2.5□□□□□ -2.01
TRA2A-203ENST00000448549 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
TRA2A-203ENST00000448549 PRM1P04553 51 aa2.18□□□□□ -2.06
TRA2A-203ENST00000448549 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
TRA2A-203ENST00000448549 INE1O15225 51 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 9.1 ms