RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 K7ERS5 55 aa5.37□□□□□ -1.55
PDLIM2-213ENST00000448520 TNP1P09430 55 aa5.22□□□□□ -1.57
PDLIM2-213ENST00000448520 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.57
PDLIM2-213ENST00000448520 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
PDLIM2-213ENST00000448520 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
PDLIM2-213ENST00000448520 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
PDLIM2-213ENST00000448520 ROMO1P60602 79 aa5.15□□□□□ -1.59
PDLIM2-213ENST00000448520 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
PDLIM2-213ENST00000448520 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
PDLIM2-213ENST00000448520 KRTAP19-7Q3SYF9 63 aa5.12□□□□□ -1.59
PDLIM2-213ENST00000448520 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
PDLIM2-213ENST00000448520 MT1EP04732 61 aa5.09□□□□□ -1.59
PDLIM2-213ENST00000448520 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
PDLIM2-213ENST00000448520 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
PDLIM2-213ENST00000448520 MT1GP13640 62 aa5□□□□□ -1.61
PDLIM2-213ENST00000448520 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
PDLIM2-213ENST00000448520 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
PDLIM2-213ENST00000448520 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
PDLIM2-213ENST00000448520 KRTAP12-3P60328 96 aa4.9□□□□□ -1.63
PDLIM2-213ENST00000448520 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
PDLIM2-213ENST00000448520 MT4P47944 62 aa4.87□□□□□ -1.63
PDLIM2-213ENST00000448520 MT1MQ8N339 61 aa4.86□□□□□ -1.63
PDLIM2-213ENST00000448520 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
PDLIM2-213ENST00000448520 MT1LQ93083 61 aa4.83□□□□□ -1.64
PDLIM2-213ENST00000448520 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
PDLIM2-213ENST00000448520 AHNAK2Q8IVF2 5795 aa4.78□□□□□ -1.64
PDLIM2-213ENST00000448520 KRTAP5-10Q6L8G5 202 aa4.73□□□□□ -1.65
PDLIM2-213ENST00000448520 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
PDLIM2-213ENST00000448520 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
PDLIM2-213ENST00000448520 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
PDLIM2-213ENST00000448520 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
PDLIM2-213ENST00000448520 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
PDLIM2-213ENST00000448520 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
PDLIM2-213ENST00000448520 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
PDLIM2-213ENST00000448520 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
PDLIM2-213ENST00000448520 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
PDLIM2-213ENST00000448520 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
PDLIM2-213ENST00000448520 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
PDLIM2-213ENST00000448520 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
PDLIM2-213ENST00000448520 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
PDLIM2-213ENST00000448520 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
PDLIM2-213ENST00000448520 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
PDLIM2-213ENST00000448520 H3BS24 57 aa4.35□□□□□ -1.71
PDLIM2-213ENST00000448520 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
PDLIM2-213ENST00000448520 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
PDLIM2-213ENST00000448520 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
PDLIM2-213ENST00000448520 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
PDLIM2-213ENST00000448520 MT1AP04731 61 aa4.12□□□□□ -1.75
PDLIM2-213ENST00000448520 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
PDLIM2-213ENST00000448520 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
PDLIM2-213ENST00000448520 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
PDLIM2-213ENST00000448520 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
PDLIM2-213ENST00000448520 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
PDLIM2-213ENST00000448520 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
PDLIM2-213ENST00000448520 MUC5BQ9HC84 5762 aaPredicted RBP3.95□□□□□ -1.78
PDLIM2-213ENST00000448520 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
PDLIM2-213ENST00000448520 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
PDLIM2-213ENST00000448520 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
PDLIM2-213ENST00000448520 MT3P25713 68 aa3.81□□□□□ -1.8
PDLIM2-213ENST00000448520 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
PDLIM2-213ENST00000448520 INE1O15225 51 aa3.72□□□□□ -1.81
PDLIM2-213ENST00000448520 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
PDLIM2-213ENST00000448520 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
PDLIM2-213ENST00000448520 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
PDLIM2-213ENST00000448520 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
PDLIM2-213ENST00000448520 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
PDLIM2-213ENST00000448520 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
PDLIM2-213ENST00000448520 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
PDLIM2-213ENST00000448520 LCE1FQ5T754 118 aa3□□□□□ -1.93
PDLIM2-213ENST00000448520 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
PDLIM2-213ENST00000448520 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
PDLIM2-213ENST00000448520 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
PDLIM2-213ENST00000448520 PRM1P04553 51 aa2.7□□□□□ -1.98
PDLIM2-213ENST00000448520 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
PDLIM2-213ENST00000448520 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
PDLIM2-213ENST00000448520 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
PDLIM2-213ENST00000448520 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
PDLIM2-213ENST00000448520 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 78.4 ms