RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
LINC00342-202ENST00000448494 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
LINC00342-202ENST00000448494 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
LINC00342-202ENST00000448494 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
LINC00342-202ENST00000448494 LCE2BO14633 110 aa3.6□□□□□ -1.83
LINC00342-202ENST00000448494 MT2AP02795 61 aa3.6□□□□□ -1.83
LINC00342-202ENST00000448494 MT1BP07438 61 aa3.59□□□□□ -1.83
LINC00342-202ENST00000448494 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
LINC00342-202ENST00000448494 NEBP20929 6669 aa3.57□□□□□ -1.84
LINC00342-202ENST00000448494 MT1FP04733 61 aa3.56□□□□□ -1.84
LINC00342-202ENST00000448494 KRTAP19-6Q3LI70 58 aa3.54□□□□□ -1.84
LINC00342-202ENST00000448494 KRTAP9-3Q9BYQ3 159 aa3.54□□□□□ -1.84
LINC00342-202ENST00000448494 HMCN1Q96RW7 5635 aa3.53□□□□□ -1.84
LINC00342-202ENST00000448494 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
LINC00342-202ENST00000448494 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
LINC00342-202ENST00000448494 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
LINC00342-202ENST00000448494 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.86
LINC00342-202ENST00000448494 LCE3BQ5TA77 95 aa3.37□□□□□ -1.87
LINC00342-202ENST00000448494 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
LINC00342-202ENST00000448494 PRM1P04553 51 aa3.31□□□□□ -1.88
LINC00342-202ENST00000448494 KRTAP4-9Q9BYQ8 210 aa3.31□□□□□ -1.88
LINC00342-202ENST00000448494 MT1LQ93083 61 aa3.3□□□□□ -1.88
LINC00342-202ENST00000448494 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
LINC00342-202ENST00000448494 MT1EP04732 61 aa3.27□□□□□ -1.89
LINC00342-202ENST00000448494 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
LINC00342-202ENST00000448494 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
LINC00342-202ENST00000448494 MDN1Q9NU22 5596 aa3.23□□□□□ -1.89
LINC00342-202ENST00000448494 KMT2DO14686 5537 aa3.22□□□□□ -1.89
LINC00342-202ENST00000448494 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
LINC00342-202ENST00000448494 KRTAP5-5Q701N2 237 aaPredicted RBP3.22□□□□□ -1.89
LINC00342-202ENST00000448494 MT1AP04731 61 aa3.21□□□□□ -1.9
LINC00342-202ENST00000448494 LCE1DQ5T752 114 aa3.21□□□□□ -1.9
LINC00342-202ENST00000448494 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
LINC00342-202ENST00000448494 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.9
LINC00342-202ENST00000448494 SPRR2EP22531 72 aa3.12□□□□□ -1.91
LINC00342-202ENST00000448494 SPRR2BP35325 72 aa3.12□□□□□ -1.91
LINC00342-202ENST00000448494 SPRR2AP35326 72 aa3.12□□□□□ -1.91
LINC00342-202ENST00000448494 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
LINC00342-202ENST00000448494 MT1GP13640 62 aa3.1□□□□□ -1.91
LINC00342-202ENST00000448494 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
LINC00342-202ENST00000448494 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
LINC00342-202ENST00000448494 SPRR2DP22532 72 aa3.03□□□□□ -1.92
LINC00342-202ENST00000448494 KRTAP4-3Q9BYR4 195 aa3□□□□□ -1.93
LINC00342-202ENST00000448494 KRTAP6-2Q3LI66 62 aa2.98□□□□□ -1.93
LINC00342-202ENST00000448494 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
LINC00342-202ENST00000448494 MT1MQ8N339 61 aa2.93□□□□□ -1.94
LINC00342-202ENST00000448494 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
LINC00342-202ENST00000448494 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
LINC00342-202ENST00000448494 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
LINC00342-202ENST00000448494 LCE5AQ5TCM9 118 aa2.85□□□□□ -1.95
LINC00342-202ENST00000448494 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
LINC00342-202ENST00000448494 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
LINC00342-202ENST00000448494 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
LINC00342-202ENST00000448494 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
LINC00342-202ENST00000448494 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
LINC00342-202ENST00000448494 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
LINC00342-202ENST00000448494 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
LINC00342-202ENST00000448494 MT4P47944 62 aa2.66□□□□□ -1.98
LINC00342-202ENST00000448494 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
LINC00342-202ENST00000448494 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
LINC00342-202ENST00000448494 MT3P25713 68 aa2.45□□□□□ -2.02
LINC00342-202ENST00000448494 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
LINC00342-202ENST00000448494 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
LINC00342-202ENST00000448494 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
LINC00342-202ENST00000448494 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
LINC00342-202ENST00000448494 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
LINC00342-202ENST00000448494 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
LINC00342-202ENST00000448494 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
LINC00342-202ENST00000448494 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
LINC00342-202ENST00000448494 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
LINC00342-202ENST00000448494 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
LINC00342-202ENST00000448494 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
LINC00342-202ENST00000448494 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
LINC00342-202ENST00000448494 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
LINC00342-202ENST00000448494 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
LINC00342-202ENST00000448494 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
LINC00342-202ENST00000448494 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms